Gene Information

Name : PPS_1509 (PPS_1509)
Accession : YP_004700964.1
Strain : Pseudomonas putida S16
Genome accession: NC_015733
Putative virulence/resistance : Unknown
Product : aminotransferase AlaT
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 1673379 - 1674590 bp
Length : 1212 bp
Strand : -
Note : -

DNA sequence :
ATGCAGTTCAGCAAATCGAACAAGCTCGCCAATGTCTGCTACGACATTCGCGGCCCAGTGCTCAAGCACGCCAAGCGCCT
GGAAGAGGAAGGCCACCGCATCCTCAAGCTGAACATCGGCAACCCGGCGCCGTTTGGCTTCGAGGCGCCTGACGAAATCC
TCCAGGATGTGATCCGCAACCTGCCCACCGCGCAGGGCTACAGCGACTCCAAAGGCCTGTTCAGCGCGCGCAAGGCGGTG
ATGCAGTACTGCCAGCAGAAGCAGATCGAAGGCGTCGGCATCGAGGACATCTACCTGGGTAATGGTGTGTCCGAGCTGAT
TGTGATGTCGATGCAGGCGCTGCTCAACAACGGCGATGAAGTGCTGATCCCTGCCCCCGACTACCCGCTGTGGACCGCCG
CCGTGAGCCTGGCCGGCGGCAAGCCGGTGCACTACCTGTGCGACGAGCAGGCCGACTGGTTCCCAGACCTTGAGGACATC
AAGGCCAAGATCACCCCGAACACCAAGGCCCTGGTGATCATCAACCCGAACAACCCGACCGGCGCGGTGTACTCCAAAGA
GCTGCTGCTGGGCATGCTGGAACTGGCCCGCCAGCACAACCTGGTGGTGTTCTCCGACGAGATCTACGACAAGATCCTGT
ACGACGAAGCCGTGCACATCAGCACCGCCTCGCTGGCCCCCGACCTGCTGTGCCTGACCTTCAACGGCCTGTCCAAGTCG
TACCGGGTGGCGGGCTTCCGTTCCGGCTGGCTGATCATCTCCGGGCCCAAGCACCACGCGCAAAGCTACATCGAAGGCAT
CGACATGCTGGCCAACATGCGCCTGTGCGCCAACGTGCCGGCCCAGCATGCCATCCAGACCGCGCTGGGCGGCTACCAGA
GCATCAACGACCTGGTGCTGCCGCCCGGCCGCCTGCTGGAGCAGCGCAACCGCACCTACGAGTTGCTGAACGACATCCCG
GGCGTTAGCTGCGTGAAGCCGATGGGTGCGCTGTATGCATTCCCGAAGATCGACCCGAAGGTTTGCCCGATCCACAACGA
CGAGAAGTTCGTGCTCGACCTGCTGCTGTCGGAAAAGCTGCTGATCGTTCAAGGTACGGCGTTCAACTGGCCGTGGCCGG
ACCACTTCCGCGTTGTCACTTTGCCGCGGGTGGATGACCTGGAGGCGGCGATTGGCCGGATCGGGAATTTCCTGAAGGGT
TATTCGCAGTAA

Protein sequence :
MQFSKSNKLANVCYDIRGPVLKHAKRLEEEGHRILKLNIGNPAPFGFEAPDEILQDVIRNLPTAQGYSDSKGLFSARKAV
MQYCQQKQIEGVGIEDIYLGNGVSELIVMSMQALLNNGDEVLIPAPDYPLWTAAVSLAGGKPVHYLCDEQADWFPDLEDI
KAKITPNTKALVIINPNNPTGAVYSKELLLGMLELARQHNLVVFSDEIYDKILYDEAVHISTASLAPDLLCLTFNGLSKS
YRVAGFRSGWLIISGPKHHAQSYIEGIDMLANMRLCANVPAQHAIQTALGGYQSINDLVLPPGRLLEQRNRTYELLNDIP
GVSCVKPMGALYAFPKIDPKVCPIHNDEKFVLDLLLSEKLLIVQGTAFNWPWPDHFRVVTLPRVDDLEAAIGRIGNFLKG
YSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-129 65
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-129 65
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 4e-129 65
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-129 65