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Name : PPS_0137 (PPS_0137) Accession : YP_004699606.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Virulence Product : reverse transcriptase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 151149 - 152402 bp Length : 1254 bp Strand : + Note : - DNA sequence : ATGAGCGGTGTGAGTTCGAACAAACCTTACAACATAGCGAAGCGCGTGATATGGGAGGCCTATCAGCAGGTCAGAACCAA CCGGGGAGCTGCTGGAATCGACGATGAGACCATTGCCGATTTTGAGCGGAACCTGCCGAAGAATCTTTACAAGCTATGGA ATCGAATGTCGTCGGGGTCTTATTTCCCGCCGCCGGTCAAGGCTGTTGAGATACCGAAGGCATCGGGGGGTATACGCAGG TTGGGAGTGCCGACGGTCAGCGACCGTATCGCACAAACTGTAGTCAAACTCCTCATCGAGCCAAAGCTGGATGCGCTTTT CCATCCGGACTCATATGGATACCGACCAGGACGTTCAGCCAAACAGGCCATAGCGATCACACGCGAACGCTGCTGGCGAT ACGACTGGGTGGTGGAGTTTGATATCAAGGCGGCTTTCGATCACATTGATCATGAACTGCTGATGAAAGCGGTGCGAACC CATATCAAAGAGGATTGGATACTGCTGTACATCGAACGATGGCTGGTTGCTCCATTCGAGGCAGCAGATGGCGTTCGCAT TCAACGCGAACGTGGCACCCCGCAAGGCGGCGTGATCAGTCCCATGTTGATGAATCTGTTCATGCATTACGCCTTTGACG CATGGATGCAACGAAATAGCCCAAACTGTCCTTTTGCCCGGTATGCCGATGATGCGGTAGTGCATTGTCGTAGCCAGAGG CAAGCAGAACACGTGATGCGTTCAATCGCTTCACGTCTAGCGGTTTGTGGCCTCACGATGCATCCCGAGAAATCGAAAAT CGTGTACTGCAAGGACAGCAATCGACGCGCAGGGTATCCGCATGTGAGCTTTACCTTCCTTGGTTTCACTTTTAGACCTA GGAAGGCAATCGGCCAGCAGAACAAGCTTTTCACCAGCTTCCTTCCGGGAGTCAGTGCGCAAGCGTTGAAGCGGATGCGG CGAGCAGTGCGCGAGTGGCGGGTCAGCCGCCAAACTCATGTGACGCTGGCTGCTGTGGCTCGGCTTTACAACCCAGTGAT ACAAGGTTGGTGGCAGTACTATGGCGCGTTCTATCGGACGGCCATGCTTGGTATCTTTCGACATATCGATAGCGCGCTCA AGCGTTGGGCCGGTCGTAAGTACAAAATACTTCACGGGCGCAAGCGGCGTATATCTAAATGGTTGGACACGGTGCATAAG GCTGCCCCTCGACTGTTTTATCACTGGCAAGTAACCGAGCAACAGGTTGGATAA Protein sequence : MSGVSSNKPYNIAKRVIWEAYQQVRTNRGAAGIDDETIADFERNLPKNLYKLWNRMSSGSYFPPPVKAVEIPKASGGIRR LGVPTVSDRIAQTVVKLLIEPKLDALFHPDSYGYRPGRSAKQAIAITRERCWRYDWVVEFDIKAAFDHIDHELLMKAVRT HIKEDWILLYIERWLVAPFEAADGVRIQRERGTPQGGVISPMLMNLFMHYAFDAWMQRNSPNCPFARYADDAVVHCRSQR QAEHVMRSIASRLAVCGLTMHPEKSKIVYCKDSNRRAGYPHVSFTFLGFTFRPRKAIGQQNKLFTSFLPGVSAQALKRMR RAVREWRVSRQTHVTLAAVARLYNPVIQGWWQYYGAFYRTAMLGIFRHIDSALKRWAGRKYKILHGRKRRISKWLDTVHK AAPRLFYHWQVTEQQVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 8e-178 | 85 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 7e-87 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PPS_0137 | YP_004699606.1 | reverse transcriptase | VFG1512 | Protein | 4e-87 | 44 |
