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Name : PPS_1147 (PPS_1147) Accession : YP_004700602.1 Strain : Pseudomonas putida S16 Genome accession: NC_015733 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1281886 - 1283388 bp Length : 1503 bp Strand : + Note : - DNA sequence : ATGAGCGACCTCAAGACCGAAGCGCAAGACCTGCAACAGGAAGAAAACGCCCTGATCGCCCTGCGCAAGGAAAAGCTTGC CGCCGAGCGCGCCAAGGGCAATGCCTTCCCCAATGACTTCCGTCGCGACAGCTACTGCAACGACCTGCAGAAGCAGTATG CGGACAAGACCAAGGAAGAACTGGAAGCTGCAGCGATTCCGGTCAAGGTTGCCGGCCGCATCATGCTCAACCGCGGCTCG TTCATGGTCATTCAGGACATGACCGGCCGTATCCAGGTCTACGTCAACCGCAAGACCCTGCCGGAAGAAACCCTGGCCGC GGTCAAGACCTGGGACCTGGGCGACATCATCAGCGCCGAAGGTACCCTGGCCCGTTCCGGCAAGGGCGACCTGTACGTCG AAATGACCAACGTGCGCCTGCTGACCAAGTCGCTGCGCCCGCTGCCCGACAAGCACCACGGCCTGACCGACACCGAGCAG CGCTACCGCCAGCGTTACGTCGACCTGATGGTCAATGAAGAAACCCGCCACACCTTCCGTGTGCGTTCGCAGGTGATCTC GCACATCCGCAAGTTCCTCATCGAGCGCGACTTCCTCGAAGTCGAGACGCCGATGCTGCAAACCATCCCGGGCGGTGCCG CGGCCAAGCCGTTCGAAACCCACCACAACGCCCTGGACATGGCCATGTTCCTGCGCATCGCGCCGGAGCTGTACCTCAAG CGCCTGGTGGTTGGTGGCTTCGAGAAGGTGTTCGAGATCAACCGCAACTTCCGTAACGAAGGCGTTTCGACTCGTCACAA CCCTGAATTCACCATGCTCGAGTTCTACCAGGCCTACGCCGACTATCGCGACAACATGGACCTCACCGAGGAACTGTTCC GCGAGCTGGCGCAGCTGGTACTGGGCACTACCGACGTGCCGTATGGCGACAAGGTGTTCCACTTCGGCGAGCCGTTCGCC CGCCTGTCGGTATTCGACTCGATCCTCAAGTACAACCCGGAGCTGACCGCTGCCGACCTGCAGGACGTCGACCGCGCCCG CGACATCGCCAAAAAGGCCGGTGCCAAGGTGCTGGGCCACGAAGGCCTGGGCAAGCTGCAGGTGATGATTTTCGAAGAGC TGGTCGAGCACAAGCTGGAGCAGCCGCACTTCATCACCGAGTACCCGTTCGAAGTATCGCCGCTGGCCCGTCGCAACGAC GACAACCCGGCTGTTACCGACCGTTTCGAGCTGTTCATCGGTGGCCGCGAGATCGCCAACGCCTACTCCGAGCTCAACGA TGCCGAAGACCAGGCCGAGCGCTTCCTGGCCCAGGTGGCCGAGAAGGACGCCGGTGACGACGAAGCCATGCACTACGACG CCGACTTCGTTCGCGCACTGGAGTACGGCATGCCGCCGACTGCAGGTGAAGGTATCGGTATCGACCGCCTGGTGATGCTG CTGACCAACTCGCCGTCGATCCGCGACGTGATCCTGTTCCCGCACATGCGTCCGCAGGCCTGA Protein sequence : MSDLKTEAQDLQQEENALIALRKEKLAAERAKGNAFPNDFRRDSYCNDLQKQYADKTKEELEAAAIPVKVAGRIMLNRGS FMVIQDMTGRIQVYVNRKTLPEETLAAVKTWDLGDIISAEGTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQ RYRQRYVDLMVNEETRHTFRVRSQVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLK RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFA RLSVFDSILKYNPELTAADLQDVDRARDIAKKAGAKVLGHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARRND DNPAVTDRFELFIGGREIANAYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML LTNSPSIRDVILFPHMRPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-138 | 60 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-78 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PPS_1147 | YP_004700602.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-138 | 60 |
