Gene Information

Name : Spica_0931 (Spica_0931)
Accession : YP_004697589.1
Strain : Treponema caldaria DSM 7334
Genome accession: NC_015732
Putative virulence/resistance : Unknown
Product : Pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1023381 - 1024259 bp
Length : 879 bp
Strand : +
Note : -

DNA sequence :
ATGGAAGATAGATTTGCAATTAATCGTGACCTGGCCCGGATGCTGAAGGGCGGGGTTATTATGGATGTCGTTAACGTTGA
GCAGGCAAAAATTGCCGAAGCCGCTGGTGCAGTAGCGGTTATGGCCCTAGAACGGGTCCCCTCTGATATTCGTAAGCAGG
GTGGGGTAGCCCGGATGAGCGACCCTGCCATGATTACTGAAATTAAGAATGCGGTCAGTATTCCCGTCATGGCCAAGTGC
CGGATTGGTCATTTTATCGAGGCCCGGATCCTCGAGGCTCTGGGTATCGATTATATTGATGAAAGCGAAGTGCTGACTCC
GGCCGATGAGTCCTATCATATTGATAAAAAGAGTTTTCGTATTCCCTTTGTCTGCGGTGCCCGTGACCTGGGTGAAGCCC
TGCGCCGCATCGGCGAAGGGGCTGCCATGATACGAACCAAGGGAGAAGCCGGTACGGGCAACGTGGTAGAAGCGGTCCGG
CACCTGCGCACCGTGAATGATGGCATCCGCCGGCTGCAGGGTTTACCCCGGGAAGAACTGATGACTGCCGCCAAAGAGCT
GGGGGCCCCCTATGATCTGGTCTGCTATGTGGCAGAAAACGGCAAATTGCCGGTGGTCAATTTTGCAGCCGGCGGTGTGG
CAACCCCCGCCGATGCGGCCCTCATGATGGCTCTGGGGGCAGATGGGGTTTTTGTCGGTTCCGGCATCTTCAAATCTTCG
GATCCAGAAAAACGGGCTAAGGCTATTGTAAAGGCCGTAACCTACTGGCAGGATGCGAAGGTTCTGGCAGAAGTTTCTGC
AGGTCTCGGTGAGCCCATGAGCGGTATCGATCTTCGGGATCTGGCACCCCAGGAACGGCTTGCTGAACGGGGCTGGTAA

Protein sequence :
MEDRFAINRDLARMLKGGVIMDVVNVEQAKIAEAAGAVAVMALERVPSDIRKQGGVARMSDPAMITEIKNAVSIPVMAKC
RIGHFIEARILEALGIDYIDESEVLTPADESYHIDKKSFRIPFVCGARDLGEALRRIGEGAAMIRTKGEAGTGNVVEAVR
HLRTVNDGIRRLQGLPREELMTAAKELGAPYDLVCYVAENGKLPVVNFAAGGVATPADAALMMALGADGVFVGSGIFKSS
DPEKRAKAIVKAVTYWQDAKVLAEVSAGLGEPMSGIDLRDLAPQERLAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-71 70
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-71 70
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-71 69