|
Name : Spica_0776 (Spica_0776) Accession : YP_004697438.1 Strain : Treponema caldaria DSM 7334 Genome accession: NC_015732 Putative virulence/resistance : Virulence Product : pyruvate kinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0469 EC number : 2.7.1.40 Position : 856346 - 858145 bp Length : 1800 bp Strand : + Note : - DNA sequence : ATGGCATTTGAACGAAACACCAGAATTATCTGTACCATGGGACCGGCAGTTCGCAGTGTGGATATGATCCGTTCTCTGAT ACGCCGAGGCATGAATATGGCTCGGTTTAACTTTTCCCATGGGGATCACGAGTATCATGGGGAAGGGATCCATATGGTTC GTGAAGCAGCTCGTTTGGAAGGGGTTCCAATAGCGCTTATTTTGGATACGAAGGGTCCCGAAATTCGAACCGGTCAGATA CAAGATGGGGGAACCATAACACTTCAGAACGGGCAGTTTATCGAGGTGATTGCTGAAGTTGAGGCAAAGAACCGCTATGG AGATCAAGGTCTTTTTACAACACCGGACCGGCTTACAGTTTCCTATGCTGATCTTGCCCAGGATGTTAAGCCAGGCGCCC GAATATTGATTGCTGACGGCCTTTTTTCCCTCGATGTTGTTCAGGTGGATGGTCCCAGTATCCGTTGTAGGGTTACTAAT GGGGGAGTCCTCGGAAGCCGAAAAAATGTGAATGTTATCGGTGTGCGAACCCGATTACCTGCCCTGTCAGAGCAAGATAA GGCGGACATTTCATTTGGGGTTGAACAGGGGATGGATTTTATTGCCGCATCTTTTGTTCGGAAAGCCGCTGATGTAACGA CCATTCACAAATATTTAGCAACCCTTAATTCGGATATACCTGTCATTGCAAAGATTGAAGATGAAGAGGGTCTTGAAAAT ATCGAAGAAATAATACGGGTTTCTGCAGGTATTATGGTTGCCCGAGGCGATTTAGGTGTCCAGATTCCTACCGAACGGGT GCCTCTCGAACAAAAACGTATCATCAGATTATGTAATCATGCTGGTAAGCCTGTCATTACCGCTACCCAGATGCTTGAAT CGATGATTAAAAATCCCCGCCCTACCCGTGCTGAAGCAGGAGATGTGGCTAATGCAATTCTTGATGGTACCGATTGTGTT ATGTTGTCAGGAGAAACCGCTAATGGCCAATTTCCCGAAGCTGCCGTTTCTGTAATGGATCAGATTGCCCGTACGGTGGA AGCTTCTGATGAATATATACGATCTCTTGAAGAACGGCGTAATACTATTGCTACGAACGAAGATATCGCGGATGCCATCG CCGATGCGTCTGCGCAGATTGCGGATCGTATTGGGGCGGTTGCTCTGGTAGTACCGACCCTACGGGGGAATACGGCCAAA CTTATTAGTCGGCATCGTCCAAGACGCAAAATTATCGCCGCTACTCCAAGCGAGACGGTACAGCGGCGGCTTCTACTCCA TTGGGGCGTGGTTCCAGTCAAGGTAGAACAGGAATCAGATTCCGAATCCATGATACAAAAGGCTATAAGCGCAGCCATTA AAGAAGGTTTTGCAAAAAAAGCTGATAAGGTTGTGGTTGTTGCGGGTATTCCTCTTAATTCACCCCTTATGACCAACAGT ATTCGGGTTCATGTAATCGGCAATATACTCGGTCGAGGACTTAATGGATTTGGAGGTCGTTGTACCGGTAGGATTGTGAA GGCTCGGACTCTAGAGGATGCCGCCCTGGCGCTTCGGAAAAATGGCGGTGAAATTCTTCTTACCCACACTCTGGACGAAA GTTTTATTCCCATACTTAGGGTTGTAGATGGGGTAATTCTCGAGGGAGTCTCTGAAATGCCCTGGGAAATGGTTAAGATA ATCAATCCCAGCATCGTCTATGTTTCCCAAGTGCCCCAGGCTCTCGATCACTTCGAAGAGCATATCACGGTTACTCTGGA TGGCTATGAGAAGCTTATCTATGAAGGGGCGCTTTTATAA Protein sequence : MAFERNTRIICTMGPAVRSVDMIRSLIRRGMNMARFNFSHGDHEYHGEGIHMVREAARLEGVPIALILDTKGPEIRTGQI QDGGTITLQNGQFIEVIAEVEAKNRYGDQGLFTTPDRLTVSYADLAQDVKPGARILIADGLFSLDVVQVDGPSIRCRVTN GGVLGSRKNVNVIGVRTRLPALSEQDKADISFGVEQGMDFIAASFVRKAADVTTIHKYLATLNSDIPVIAKIEDEEGLEN IEEIIRVSAGIMVARGDLGVQIPTERVPLEQKRIIRLCNHAGKPVITATQMLESMIKNPRPTRAEAGDVANAILDGTDCV MLSGETANGQFPEAAVSVMDQIARTVEASDEYIRSLEERRNTIATNEDIADAIADASAQIADRIGAVALVVPTLRGNTAK LISRHRPRRKIIAATPSETVQRRLLLHWGVVPVKVEQESDSESMIQKAISAAIKEGFAKKADKVVVVAGIPLNSPLMTNS IRVHVIGNILGRGLNGFGGRCTGRIVKARTLEDAALALRKNGGEILLTHTLDESFIPILRVVDGVILEGVSEMPWEMVKI INPSIVYVSQVPQALDHFEEHITVTLDGYEKLIYEGALL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pykF | YP_216386.1 | pyruvate kinase | Not tested | SPI-2 | Protein | 1e-69 | 42 |
| pykF | NP_805051.1 | pyruvate kinase | Not tested | SPI-2 | Protein | 1e-69 | 42 |
| pykF | CAA68205.1 | pyruvate kinase like protein | Not tested | SPI-2 | Protein | 4e-69 | 42 |
| STY1744 | NP_456147.1 | pyruvate kinase | Not tested | SPI-2 | Protein | 2e-69 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Spica_0776 | YP_004697438.1 | pyruvate kinase | VFG0479 | Protein | 5e-70 | 42 |
