|
Name : Spica_2714 (Spica_2714) Accession : YP_004699319.1 Strain : Treponema caldaria DSM 7334 Genome accession: NC_015732 Putative virulence/resistance : Unknown Product : leucyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0495 EC number : 6.1.1.9 Position : 3068306 - 3070765 bp Length : 2460 bp Strand : + Note : - DNA sequence : ATGGCCAAATATCCTTTTGACACGATTGAGCCGAAATGGCAAAAATATTGGGAAGAGCACAAAACCTTTAAGGCGGTAGA AGATCCCGCATTCCCCAAGGAAAAACGCCAGTATGTACTGGACATGTTCCCCTACCCATCTGCCCAGGGCCTCCACGTGG GGCATCCGGAGGGCTACACCGCCACCGACATTTATTGCCGCTACCTCAGAATGAACGGCTTTAACGTGCTCCATCCCATG GGCTTCGATGCCTTTGGGCTTCCCGCAGAAAACTATGCAATAAAGACCGGAACCCACCCGGCCACCACCACCCGGGCAAA CATCGATAAATTCCGCACCCAAATTAAGGCCCTCGGGTTTTCTTATGACTGGGACCGGGAAGTGTCTACCTGCGAAGCGG ATTATTACAAGTGGACCCAATGGATTTTCCTGAAACTCTTTGAAAAGGGCTTGGCCTACGAGGCAGAAACACCGATTAAC TGGTGTCCCTCTTGTAAAACAGGCTTGGCCAACGAAGAGGTAAAGGATGGTGCCTGCGATCGCTGCGGCACCAAGGTTAC CCGGAAACGGATCCGGCAATGGATTTTAAAAATCACCGCCTATGCGGAACGGCTCTTGGAAGACCTGGACCTGCTCGATT GGCCCGAACCGGTAAAATTGATGCAGCGGAACTGGATCGGTAAATCTGAAGGGGCTAATGTCATCTTTAAAATTGATGGC CATGATGCGGAGCTAGAGATTTATACGACCCGTCCTGACACCCTTTTTGGTGCAACCTACATGGTGCTCGCCCCGGAGCA TCCCCTGGTACCAAAAATTACCACTGCGGAACAGAAAGCAGCTGTAGAGGCTTATTTGGATGCAGCAGCTAAGAAGAGTG ATCTGGAGCGAACCGACCTGGCAAAGGAAAAAACCGGTGTATTCTCAGGGGCTTATGCTCTTAATCCGGTAAACGGAAAA AAGATCCCCATCTGGATTGCCGATTATGTACTCATTTCCTACGGCACCGGGGCTATTATGGCGGTGCCCGCCCACGATGA ACGGGACTGGGACTTTGCCAAGGCTTTTAACCTCCCCATTATTCAGGTAGTGGCCGGTGAACCGCCTGCTATAGGGAAAG ATTATTCCCAAACTCCGGAAACCTGTACAACCGCCGATGGCTGGGCGGTCAATTCAGGGCCCTTTGATGGAACGCCCACC GCTGAATTTAAACAAAAAATCATTGGCTGGCTCGAAGAAAAGGGTATCGGCAAGCGGGCAGTAAACTACAAACTTCGGGA CTGGATCTTCAGCCGCCAGCGTTATTGGGGCGAACCAATTCCGATTGTACACTGTGAATCCTGCGGCATTGTCCCCCTGC CAGAGGATCAGCTTCCCCTAACCCTCCCGGATGTACAGTCCTATGCACCAACCGGCACCGGCGAATCCCCCCTGGCAGGC ATTACCGACTGGGTTAACACCACCTGTCCCAAATGCGGAGGCAAGGCAAAACGGGAAACCAACACCATGCCCCAGTGGGC CGGTTCTTGCTGGTACTACCTGCGCTACCTCGATCCCCACAATGACAAGGAATTTGCCTCTAAAAAGGCGATAGAGTACT GGATGCCCGTAGACCTGTATGTGGGCGGCACGGAACACGCGGTTCTGCACCTCCTGTACAGCCGGTTCTGGCATAAGGTG CTTTACGACCTAGGGCTTGTGAACTCTAAGGAACCATTCCAACGGCTTGTAAACCAGGGCATGATTCTTGGGGAAGATGG CCAAAAAATGAGTAAAAGTCGGGGTAATGTTATCAATCCTGATGACATTATTCGGGACTATGGTGCCGATTCCATGCGGG TTTATGAAATGTTTATGGGCCCCCTGGAAGTAAGTAAACCCTGGGCAACCGCCGGCCTCGTTGGTGTATCTCGTTTCCTT GAACGGCTCTGGGCTCTGGGGGAAAAACCTTTGGCAGACACACCAGAAGCGGCGGGAATTTCCAGCGACCAGAAAACAGA ATTACTACGTATTCTGCATAAAACTATAAAAAAAGTTACTGATGACACGTCAACCCTCAATTTTAACACCGCCATCAGTG CGATGATGGTTTATTCATCTGAACTGGCAAAGCTGGAAAAACTACCCAGACCCTTCTGGGAACCTCTGGTACAGATGGTT AGCCCCTATGCTCCCCACCTGGCGGAAGAGCTTTGGGAAAAATTAGGGTACAAGGAATCCATTTCTAAGAGCCAATGGCC ACAATATGATGCAAGCCTCGCGGCGGATAACGAGGTAACGATTGTAGTTCAGGTGAACGGCAAAATTCGCGACAAATTCA CCGCGCCTATTGGGATTTCCAAAGCGGAACTGGAAAAAACAGCCCTAAACCTGCCCGGCATTCAGAAATGGCTCGAAGGC CTTACCATTGCCAAAGTTATTTCTGTGCCGGATAAATTAGTAAATATCGTCGTAAAATAA Protein sequence : MAKYPFDTIEPKWQKYWEEHKTFKAVEDPAFPKEKRQYVLDMFPYPSAQGLHVGHPEGYTATDIYCRYLRMNGFNVLHPM GFDAFGLPAENYAIKTGTHPATTTRANIDKFRTQIKALGFSYDWDREVSTCEADYYKWTQWIFLKLFEKGLAYEAETPIN WCPSCKTGLANEEVKDGACDRCGTKVTRKRIRQWILKITAYAERLLEDLDLLDWPEPVKLMQRNWIGKSEGANVIFKIDG HDAELEIYTTRPDTLFGATYMVLAPEHPLVPKITTAEQKAAVEAYLDAAAKKSDLERTDLAKEKTGVFSGAYALNPVNGK KIPIWIADYVLISYGTGAIMAVPAHDERDWDFAKAFNLPIIQVVAGEPPAIGKDYSQTPETCTTADGWAVNSGPFDGTPT AEFKQKIIGWLEEKGIGKRAVNYKLRDWIFSRQRYWGEPIPIVHCESCGIVPLPEDQLPLTLPDVQSYAPTGTGESPLAG ITDWVNTTCPKCGGKAKRETNTMPQWAGSCWYYLRYLDPHNDKEFASKKAIEYWMPVDLYVGGTEHAVLHLLYSRFWHKV LYDLGLVNSKEPFQRLVNQGMILGEDGQKMSKSRGNVINPDDIIRDYGADSMRVYEMFMGPLEVSKPWATAGLVGVSRFL ERLWALGEKPLADTPEAAGISSDQKTELLRILHKTIKKVTDDTSTLNFNTAISAMMVYSSELAKLEKLPRPFWEPLVQMV SPYAPHLAEELWEKLGYKESISKSQWPQYDASLAADNEVTIVVQVNGKIRDKFTAPIGISKAELEKTALNLPGIQKWLEG LTIAKVISVPDKLVNIVVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| leuS | YP_281511.2 | leucyl-tRNA synthetase | Not tested | Not named | Protein | 0.0 | 55 |
