Gene Information

Name : Spica_1216 (Spica_1216)
Accession : YP_004697870.1
Strain : Treponema caldaria DSM 7334
Genome accession: NC_015732
Putative virulence/resistance : Unknown
Product : aspartate transaminase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : 2.6.1.1
Position : 1365739 - 1366956 bp
Length : 1218 bp
Strand : +
Note : -

DNA sequence :
ATGCGCATGTTTAATAAGTCCCATAAACTTGACAATGTCTGTTACGATATTCGCGGGCCCGTCATGAAAGAGGCAAAACG
GATTGAGGCAGAGGGCTTTCGGGTCCTTAAGTTAAATATTGGTAATCCTGCGGCCTTTGGTTTTAATGCCCCCGATGAAA
TTTTACATGATATTATCGTCAATCTTCAGAATGCCCAGGGGTATTCGGACTCTCAGGGTATTTTTGTGGCCCGCAAGGCT
ATTATGCAGGAATTTCAGTCTAAGGGCATTATGGATGTAACCGTCGATGATATTTTCATCGGCAACGGGGTGAGTGAGCT
CATCATGATGGCGATGCAAGGCCTGCTTGATGAAGGAGATGAAGTCCTGGTTCCCTCACCGGATTATCCCCTGTGGACCG
CTGCAATTACCCTTGCGGGGGGTAAGGCAGTTCACTATCTCTGTGATGAGGCATCAGACTGGAACCCCGACCTGAGCGAT
ATTACATCCAAAGTTACCAGCCGCACCAAGGCTATAGTCGTTATCAATCCGAATAATCCAACCGGTGCGGTCTATGATAG
AACTATACTGGAAGGTATCGCTGCTATCGCCAGTGAATCGGATCTACTGGTCTTTGCGGATGAAATCTATGACAAAATAC
TCTACGATGGGGCGGTCCACATTCCCATGGCAAGCATCAATCCGGATATTTGTACCATTTCCTTTAACGGCCTTTCCAAG
GCATACCGGGCGGCGGGCTTCCGCTCCGGGTGGATGGTCATTTCCGGCAATAAGCGGATCATCTCAGGATATCGGGAAGG
GCTGGAGATGCTTTCCAATATGAGGCTCTGCGCCAATGTCCCTGCCCAATACGGTATACAGACTGCCCTTGGCGGCTACC
AGAGTATTAAAGACCTGGTTCTGCCCGGTGGTCGCCTTAAGGAACAGCGGGATACCTGTGTTTCCCTGGTAAACTCTATC
CCCGGCCTTTCGGTAACCAACCCCAAGGGAGCCCTCTATTGTTTCCCAAAGATTGATGTAAAGCGTTTCAATATTACCGA
CGACGAGCAGTTTGTGATGGACCTTTTGCGGGACCAGCGGATTCTCTTAGTTCAGGGTACAGGATTTAACTGGAAAGAAC
CGGATCATTTCAGAATTGTCTTTTTACCTGATAAGGAAACCATTGCGGATGCCATGAACCGGCTTCGCACCTTTCTGACA
ACCTATAAACAGCTTTGA

Protein sequence :
MRMFNKSHKLDNVCYDIRGPVMKEAKRIEAEGFRVLKLNIGNPAAFGFNAPDEILHDIIVNLQNAQGYSDSQGIFVARKA
IMQEFQSKGIMDVTVDDIFIGNGVSELIMMAMQGLLDEGDEVLVPSPDYPLWTAAITLAGGKAVHYLCDEASDWNPDLSD
ITSKVTSRTKAIVVINPNNPTGAVYDRTILEGIAAIASESDLLVFADEIYDKILYDGAVHIPMASINPDICTISFNGLSK
AYRAAGFRSGWMVISGNKRIISGYREGLEMLSNMRLCANVPAQYGIQTALGGYQSIKDLVLPGGRLKEQRDTCVSLVNSI
PGLSVTNPKGALYCFPKIDVKRFNITDDEQFVMDLLRDQRILLVQGTGFNWKEPDHFRIVFLPDKETIADAMNRLRTFLT
TYKQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 6e-118 60
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 6e-118 60
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 6e-118 60
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 6e-118 60