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Name : Nit79A3_0675 (Nit79A3_0675) Accession : YP_004693953.1 Strain : Nitrosomonas sp. Is79A3 Genome accession: NC_015731 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 734784 - 736673 bp Length : 1890 bp Strand : + Note : PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: nit:NAL212_0301 polysaccharide biosynthesis protein CapD DNA sequence : ATGTTTCGCAGAAAATACGGAATACGCACCTTCATTGCTTTCACGCATGATTTTATTGCAATTGCCGTAGCATGGTGGCT TGCTTATCTATTTCGTTTTAATTTTGAGATTCCTGCGCCTTCATTACAGCTCTTGCTGGAAATTCTGCCGTGGACAGTGC TTGTTCAGGGCAGTTTCTTTTTGTGGCTCGGACTTTACCGCGGATTATGGCGCTATGCCAGCCTACCTGATCTAAAAAGA ATTTTTGTCACGGTGATAAGCGGTACTGTGACTGTATTGCTGATCTTGTGGCCATTGGGTTTGCTGGTCAATATTCCAAT AGCGGTCATTCTGTTGGCGCCATTATTATTGCTGCTGATCATGGGTGGCAGCCGTTTAACCTATCGCGCATGGAAAGAGC GCCGTCTCTATGGTCTGGAGAGTAATGAAGCGAAGCTGGTATTGATACTCGGCGCCGGCAGTACTGCAGTGAGTCTGGTT AAAGATTTGACGAGAAGCCGTGACTGGCACGTTGTTGGAATGCTGGATGATGATCCAAGAAAATTGGGTACGCGATTGCA AGGCATTCGTGTGCTCGGCACGATCAATGAATTGCCGCAGTGGGTGCAGAAACTGAATGTCGGTCATGTGATTATTGCCA TACCATCCGTTTCTCGTCGAATACACCGCCAAGCTTTGGAGATGTGCTCGGAAATCGGCGTGAAAGCGATGACGGTGCCG TCTTACGCAGATCTGATCAGTGGTAAAACCACCGTGTCACAGATTCGTGAGATAGAGCTCGATGATTTGCTGGGTAGAGC GCCTGTAGTTTTGGATAATGACGGATTACATGGTTTGCTGACAGGAAAAGTAATCCTGGTTACAGGAGCGGGCGGTTCGA TTGGGTCAGAATTATGCCGCCAGCTCGCTGCATTTAAACCCAATCGCATTGTTTTCCTTGAACTGAACGAATTTGCACTC TACAGCATACAAGAGGAATTCTTGTCGCGTTTTCCTGGCATGGCTATGTCGTTTGTCATCGGTGATATCAAAGACCATGC GCGCATGACACAATTATTCACGCAATTCCGGCCTTCCGTAGTCTTTCATGCCGCTGCTTACAAGCATGTTCCGCTCATGG AACAAGAAAATGCGTGCCAAGCTTTGCTGAATAATGTCCTGGGTACGTATGTGCTGGCTCAGGTGGCGATAAGTTTTGGC GTGAAAAAATTTGTACTTATTTCGACAGATAAAGCGGTCAATCCTGTGAGTGTTATGGGAGCCAGTAAGCGACTGGCTGA GATGGTGTGTCAAGCTTTGCAGCAGTCTATTACAAAGAATGCGAAACCTGACCAGAATAATCAATCGAATCAAACCTGCT TTGTAATGGTGCGTTTTGGCAATGTATTGGGTAGTACCGGCAGTGTTATCCCAAAATTTCGCGAACAGATTGCCAGAGGG GGTCCCATCACGATCACTCATCCGGAAATGACACGTTATTTCATGTCTATCCCGGAGGCGGCACAACTGGTTTTACAAGC CGGGCTGATGGGAGGGACAAAAGGCGGCGGGGAAATATTTGTGTTGGATATGGGTGACCCGGTCAAGATTGTTGATCTGG CTAATGATCTAATCCATTTGTCGGGATTGGGAGAGGATGATATTCGTATTGTTTTCAGTGGACTGCGGCCTGGTGAGAAG TTGCATGAGGAGCTGCTGGCAGCCAGTGAGAATACTTTTCCGACACCGCATCAAAAATTACGTATTGCGCAGGCACGCCA GGTTGATGAACAGTGGCTATCCGAGCTGACTGTCTGGTTGAATAAAATAACTGTTTTAAGCGATCAGGAAGTCCGGGATC AACTGGTCAAGTGGGTGCCGGAATATATCACTAAGGAAACGGAGCATTAA Protein sequence : MFRRKYGIRTFIAFTHDFIAIAVAWWLAYLFRFNFEIPAPSLQLLLEILPWTVLVQGSFFLWLGLYRGLWRYASLPDLKR IFVTVISGTVTVLLILWPLGLLVNIPIAVILLAPLLLLLIMGGSRLTYRAWKERRLYGLESNEAKLVLILGAGSTAVSLV KDLTRSRDWHVVGMLDDDPRKLGTRLQGIRVLGTINELPQWVQKLNVGHVIIAIPSVSRRIHRQALEMCSEIGVKAMTVP SYADLISGKTTVSQIREIELDDLLGRAPVVLDNDGLHGLLTGKVILVTGAGGSIGSELCRQLAAFKPNRIVFLELNEFAL YSIQEEFLSRFPGMAMSFVIGDIKDHARMTQLFTQFRPSVVFHAAAYKHVPLMEQENACQALLNNVLGTYVLAQVAISFG VKKFVLISTDKAVNPVSVMGASKRLAEMVCQALQQSITKNAKPDQNNQSNQTCFVMVRFGNVLGSTGSVIPKFREQIARG GPITITHPEMTRYFMSIPEAAQLVLQAGLMGGTKGGGEIFVLDMGDPVKIVDLANDLIHLSGLGEDDIRIVFSGLRPGEK LHEELLAASENTFPTPHQKLRIAQARQVDEQWLSELTVWLNKITVLSDQEVRDQLVKWVPEYITKETEH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-87 | 48 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-84 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Nit79A3_0675 | YP_004693953.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 6e-88 | 48 |
| Nit79A3_0675 | YP_004693953.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 5e-76 | 42 |
