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Name : Nit79A3_3259 (Nit79A3_3259) Accession : YP_004696392.1 Strain : Nitrosomonas sp. Is79A3 Genome accession: NC_015731 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3457714 - 3459405 bp Length : 1692 bp Strand : - Note : PFAM: Type II secretion system protein E; KEGG: nit:NAL212_2917 type II secretion system protein E DNA sequence : TTGATTGAAGCGTCGATACCATCCGGGAACAAGCAACCGATTGATATCAATCGCCTGGCTGATGTCCGGCGCAGGGCATT CGAACAAGGCATTTCTGTTATCCAGATTTTGGAAGAAACCGGCGGCTATACACCCGATGAGTTGGTACAGCAGTTAGGGC AACTACTGCATTTGCCGGTGCTGGAAATGAAAGCGATCCATGCCTTAAGTCCGGCATTTGATCGCTTGCCTTTCGCGGAA GCAATCCTGCATGAATGCGTATTATTTCGTCGAGACCAGAACTATTTGCTTGCTGTCAGTAATCCATTTTCAAGCAAATT GCGCGCATGGGCAGAAGAGCGTTTCGATATGGCTGTTGAATGGTATTTGGTGCATCCGGCCGACCTGACTGCTTTTTTTA CTCAGCAAGAAAAAACCATGCGTGCCATGGATCAAGTATTACCTTCTACTGAGCTAGACAATATACAAAGCGGCATCGAA GATCTGTCGTTAAAGAGCATCAATGCGGGTACCAGCCAGGTTGTACGGCTGGTACATTCTACGTTGTATGACGCGCACAA ATCCCAGGCCAGCGATATTCATCTGGAAATGACAACCGGTGCGCTCTCGATCAAATACCGCATCGATGGTGTATTAACAT CCATTGGTGTGATGCAGGGCGCGGACTTGGCTGAGCAAGTCATTTCCCGGATCAAAGTGATGTCGGAATTGGATATCGCT GAGCGCCGGGTGCCGCAAGATGGCCGATTTAAGATTTCTATTCAGGGACGGGAAATTGATTTTCGCGTTTCCATCATGCC GAGTATTTTTGGCGAAGACGCTGTCTTGCGTATTCTTGACCGGCAAGCGCTATCCGATCATATTGAAGGATTGACATTAA ACCAGCTGGGTTTTAATCAAGCAGCCATTGCGATTATTCGCCGCCTTAGCTCGGAACCCTATGGAATGTTGCTGGTTACG GGTCCAACCGGCAGTGGTAAGACAACCTCGCTGTATGCGGCGATATCGGAAGTGAATCAGGGCCATGACAAGATCGTTAC CATTGAGGATCCGATTGAGTATCAGTTGCCCGGTGTTTTGCAAATACCGGTTAATGAGAAAAAAGGACTGACCTTCGCGC GGGGGCTGCGCTCAATCTTGCGTCATGATCCTGATAAGATAATGGTGGGTGAGATTCGTGACGCTGAAACAGCGCAAATC GCCATACAGGCTGCGCTGACCGGGCATCTTGTATTTACAACGGTTCATGCCAATAATGTGTTTGATGTCATTGGACGCTT TTCCCATATGGGCGTGGATCCTTACAGCTTTGTATCTGCCTTGAACGGGATCGTTGCGCAGAGATTAGTGCGTTTGTTAT GTGTACACTGCGCAGTGGATGAACGCCCGGAGGATAAACTGATTGCAGAATCCGGAATTTCCGCCGACGAAGTCAGCCAA TTTAAGTTTCGTAGTGGAAAAGGCTGCGGCCAATGCCGGGGAAGCGGGTATCGGGGAAGAAATGCAATTGCCGAGATTCT GATTTTGAATGATGAAATCCGCGAACTGATTGTTGCACAAGAGCCGATACGGCGTATCAAAGAAGCGGCCCGAAACAATG GCACGCGTTTTCTCAGAGAAGGCGCTTTAGATATGGTCAAGCAAGGATTAACCAGTTTAGAGGAGGCAAACCGTGTCACA ATTGTGGCGTGA Protein sequence : MIEASIPSGNKQPIDINRLADVRRRAFEQGISVIQILEETGGYTPDELVQQLGQLLHLPVLEMKAIHALSPAFDRLPFAE AILHECVLFRRDQNYLLAVSNPFSSKLRAWAEERFDMAVEWYLVHPADLTAFFTQQEKTMRAMDQVLPSTELDNIQSGIE DLSLKSINAGTSQVVRLVHSTLYDAHKSQASDIHLEMTTGALSIKYRIDGVLTSIGVMQGADLAEQVISRIKVMSELDIA ERRVPQDGRFKISIQGREIDFRVSIMPSIFGEDAVLRILDRQALSDHIEGLTLNQLGFNQAAIAIIRRLSSEPYGMLLVT GPTGSGKTTSLYAAISEVNQGHDKIVTIEDPIEYQLPGVLQIPVNEKKGLTFARGLRSILRHDPDKIMVGEIRDAETAQI AIQAALTGHLVFTTVHANNVFDVIGRFSHMGVDPYSFVSALNGIVAQRLVRLLCVHCAVDERPEDKLIAESGISADEVSQ FKFRSGKGCGQCRGSGYRGRNAIAEILILNDEIRELIVAQEPIRRIKEAARNNGTRFLREGALDMVKQGLTSLEEANRVT IVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-77 | 45 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-77 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Nit79A3_3259 | YP_004696392.1 | type II secretion system protein E | VFG1876 | Protein | 3e-76 | 48 |
| Nit79A3_3259 | YP_004696392.1 | type II secretion system protein E | VFG2048 | Protein | 1e-77 | 45 |
