Gene Information

Name : Nit79A3_3172 (Nit79A3_3172)
Accession : YP_004696306.1
Strain : Nitrosomonas sp. Is79A3
Genome accession: NC_015731
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 3356064 - 3356513 bp
Length : 450 bp
Strand : -
Note : KEGG: nit:NAL212_0698 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding

DNA sequence :
ATGGCATCAGTCAATAAAGTTATACTCATTGGTAACTTGGGAAAAGACCCGGAAACTCGTTACATGTCAAATGGTGATGC
GGTAACGAATATTACATTGGCAACGACAGATACCTGGAAAGACAAGAATGGTGAGAAACAGGAAAAGACTGAATGGCATC
GCGTAACCTTTTATCGCAAGCTCGCAGAAATTGCGGGGGAATACTTAAAGAAAGGCCGCCCTGTGTATATAGAGGGCAGG
CTGGAAACCCGGAAATGGACTGATAAAAATGGTGTAGAACGTTATACGACGGATATTATTGCAAGCGACATGAAAATGTT
GGGCAATCGATCAGGAAGCGGTAGCTTTGAGTCACCTGATCATGAAGAAGTAAATTCTGCTCCTAACCGCTCTTCTTCAG
CTAAGAGTGCAGGTGGATTTGATGATATGGATGATGATATCCCGTTCTAG

Protein sequence :
MASVNKVILIGNLGKDPETRYMSNGDAVTNITLATTDTWKDKNGEKQEKTEWHRVTFYRKLAEIAGEYLKKGRPVYIEGR
LETRKWTDKNGVERYTTDIIASDMKMLGNRSGSGSFESPDHEEVNSAPNRSSSAKSAGGFDDMDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 1e-34 53
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 1e-34 53
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 8e-35 53
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 9e-35 50