|
Name : Nit79A3_3071 (Nit79A3_3071) Accession : YP_004696209.1 Strain : Nitrosomonas sp. Is79A3 Genome accession: NC_015731 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 3252419 - 3254185 bp Length : 1767 bp Strand : + Note : KEGG: nit:NAL212_1335 dihydrolipoamide dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Biotin/lipoyl attachment; Pyridine nucleotide-disulphide oxidoreductase, dimerisation DNA sequence : ATGACGCAAGTTGTCGAAATAAAGATCCCCGATATCGGTGATTTCAAGGATGTTCCGGTCATTGAGCTGCTCGTCTCCCC CGGCGATACGGTTGAAAAGGAAACTTCGCTGATCACTTTGGAAACGGACAAAGCTTCAATGGAAGTGCCTTCCCCATACG CCGGTATCGTGCAAGAAATCAAAGTCAAAGCAGGTGACAAAGTGTCAGAGGGTTCAGTCATTCTGACTTTGGCAGTGACT GAGCAACCCGCAGCCGCAACGCACTCAGAAGCCACAACCACAACCAGCGAAAAAGCAATTGCTGCTCCCATTGTTACCCC ACCCCCTGCGCCAATATCACCGCAATCCATCCCACTGGGAGACATTCACGCGGACGTGGTAGTACTTGGCGCTGGCCCCG GAGGATATACCGCCGCTTTTCGCGCCGCCGATTTGGGTAAAAAGGTAGTTTTAATCGAGCGCTATGCCGCACTCGGTGGC GTGTGCTTGAATGTTGGCTGCATTCCTTCCAAGGCTTTGCTGCATGCGGCTAAAGTAATCACGGAAGCGGAAGATGTTGA ATCGCAGGGCATAGCTTTTGGCAAACCCCAAATCGATATGGATAAGCTGCGCACGTGGAAAGAATCGGTGATCGGCAAAC TGACCAAGGGCCTGAAAGCACTGGCGAAACAACGCAAGGTAGAAATCGTCCATGGCACCGGAAAATTTGCCATGCCCCAT CTGATTCAGGTCGAAACTACGGAGGGACAGAAAACAATTTCTTTCGAGCAGTGCATTATCGCAGCCGGTTCCAGTGTCGC CCGCATCCCCGGTTTTCCTTACGATGATCCGCGCTTGATTGATTCTACCGGAGCGCTTGAACTAAAAGATGTGCCGAAAC ACATGCTGGTTATTGGTGGCGGTATCATCGGCCTGGAAATGGCCACGGTCTATTCCGCACTGGGAAGCAAAATCAGCGTG GTGGAATGGATGGATCAATTGATCCCGGGCGCTGATCCCGATCTGATCAAACCGCTGCATCGCCGTATCAAGAAGCGCTA CGAAGCGATCTATTTGAAAACCAAAGTGACTCAGATTGAAGCCGGTGAATCCGGGCTGACAGTGACCTTTGAGGGAGAAA ATGCGCCGGAACCGCAAACCTATGACCGTATTTTAATGGCCGTCGGCCGCCGCCCGAATGGGCGCGCTATCGGTGCCGAA GAAATCGGCATTCAAGTCAACGAACGCGGCTTTATCCCGGTGGATCAGCAAATGCGCACCAACTTGCCGCACATTTTTGC GATTGGTGATATCGTGGGTGAGCCGATGCTGGCGCATAAAGCCACTTATGAAGGCAAATTGGCTGCAGAGATTATTGCCG GACATAAAGCCATCTTTGATGCCCGTACCATTCCTTCCGTTGCTTATACCGATCCTGAAATTGCCTGGATGGGTCTGACT GAGAAAGAAGCCATCAAGCAAGGTATCGATTATGAGAAAGCCAGCTTCCCCTGGGCTGCTAGCGGCCGTGCCATATCCAT GGCGCGCGAAGAAGGATTGACGCAACTGCTGCTGGATAAAAATACCCGTCGTATATTGGGTGCCGGCATAGTGGGCATCA ATGCCGGCGAGTTGATCGCTGAAACGGTTTTAGCGCTGGAAATGGGTGCGGATATGCAAGATATCAGTCTGACCATTCAT CCGCATCCGACGCTTTCGGAAACCGTACTGTTCGCTGCCGAAATGGCGGAAGGAACTATCACAGATCTCTATATACCAAA GAAATAG Protein sequence : MTQVVEIKIPDIGDFKDVPVIELLVSPGDTVEKETSLITLETDKASMEVPSPYAGIVQEIKVKAGDKVSEGSVILTLAVT EQPAAATHSEATTTTSEKAIAAPIVTPPPAPISPQSIPLGDIHADVVVLGAGPGGYTAAFRAADLGKKVVLIERYAALGG VCLNVGCIPSKALLHAAKVITEAEDVESQGIAFGKPQIDMDKLRTWKESVIGKLTKGLKALAKQRKVEIVHGTGKFAMPH LIQVETTEGQKTISFEQCIIAAGSSVARIPGFPYDDPRLIDSTGALELKDVPKHMLVIGGGIIGLEMATVYSALGSKISV VEWMDQLIPGADPDLIKPLHRRIKKRYEAIYLKTKVTQIEAGESGLTVTFEGENAPEPQTYDRILMAVGRRPNGRAIGAE EIGIQVNERGFIPVDQQMRTNLPHIFAIGDIVGEPMLAHKATYEGKLAAEIIAGHKAIFDARTIPSVAYTDPEIAWMGLT EKEAIKQGIDYEKASFPWAASGRAISMAREEGLTQLLLDKNTRRILGAGIVGINAGELIAETVLALEMGADMQDISLTIH PHPTLSETVLFAAEMAEGTITDLYIPKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 3e-83 | 41 |
