Gene Information

Name : Nit79A3_2917 (Nit79A3_2917)
Accession : YP_004696067.1
Strain : Nitrosomonas sp. Is79A3
Genome accession: NC_015731
Putative virulence/resistance : Unknown
Product : Tyrosine recombinase xerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3081535 - 3082446 bp
Length : 912 bp
Strand : -
Note : TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerD; KEGG: nit:NAL212_2724 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage

DNA sequence :
ATGAGAGCACCTGAACTAAATGCCGGTTTGCTGGATGAGTTTTCCGATGCCTTATGGCTGGAAGATGGCTTATCGCGTAA
TACACTGGATAGTTACCGTAACGATCTACAGCTTTTTAGTGAATGGCTAAGAAAACGAAATCAAGATAATAGTGTACTAA
CTGACGCAACGCACTCTGACTTGCTCGATTTTCTGGCGTCCAGAGTTTCCGCTAAAATGAAGGCCAGTACAACAAGCCGT
GAATTGTCCAGCTTAAAGCGTTTTTACCGTTTCTTATTGCGCCAAGGCAAAATTACGACAGATCCCAGTCTCAACATTGA
TACACCCAAACTGCAGCGCAGCCTGCCCGATAGCCTTACAGAGACAGAAGTCGAGCTGCTGCTGAGCGCACCTGATCTTA
AACACCCGCTCGGTTTGCGTGATCGTGCGATGCTGGAAGTTCTGTATGCCAGTGGATTACGGGTATCTGAACTGATCAAC
CTAAGATATTCGCAAGTCAGCATGGATATGGGAGTGTTACGAGTCATGGGCAAGGGGAGAAAGGAACGCCTTGCTCCGCT
TGGAGAAGAATCTCTTGAGTGGTTGAGCCGTTATACCAAAGAAGCCAGACCTGCTTTGCTGAATGGTATTGTTACCGATA
CCATATTTGTGACAACACGCGGAGCTGCAATGACACGCCAGGCATTCTGGTATCTCATCAAACGTTATGCGCAACTAGTG
GGTAATGATAAGCCGCTATCCCCGCACACCCTGCGCCATGCATTTGCTACTCACTTGTTGAATCACGGTGCTGATTTGCG
AGTGGTACAATTACTGTTGGGTCACGCAGATATCTCCACTACGCAGATTTATACCCATATCGCGCGTGAACGCCTGAAAC
AATTGCATACCAAGCATCATCCTCGCGGATAG

Protein sequence :
MRAPELNAGLLDEFSDALWLEDGLSRNTLDSYRNDLQLFSEWLRKRNQDNSVLTDATHSDLLDFLASRVSAKMKASTTSR
ELSSLKRFYRFLLRQGKITTDPSLNIDTPKLQRSLPDSLTETEVELLLSAPDLKHPLGLRDRAMLEVLYASGLRVSELIN
LRYSQVSMDMGVLRVMGKGRKERLAPLGEESLEWLSRYTKEARPALLNGIVTDTIFVTTRGAAMTRQAFWYLIKRYAQLV
GNDKPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHIARERLKQLHTKHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-61 52
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-61 52