Gene Information

Name : Nit79A3_2586 (Nit79A3_2586)
Accession : YP_004695752.1
Strain : Nitrosomonas sp. Is79A3
Genome accession: NC_015731
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2763973 - 2764659 bp
Length : 687 bp
Strand : +
Note : KEGG: nit:NAL212_1247 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver

DNA sequence : 
ATGCGCATCCTAGTCATCGAAGATGAAATCAAATTACAAAACCAGATTCGCCAGCAACTGGAATCCATGGGTTATATGGT
TGACACCTGCAGTGACGGCGAGGAAGGATTATTTTTTGCCACGGAATACCCTTTGGATGCCGCCATAATTGATATCGGAT
TGCCCGGCAAATCCGGATTGGAAATTATCAAGGCACTACGTGAGCAAGGCAGTCTGTTGCCCATTCTGATCCTAACCGCC
AGAAGCGGCTGGCAAGATAAAGTTCAAGGTCTGGAAATGGGGGCTGATGATTACCTCACCAAGCCGTTTCAAATGGAGGA
ACTGCAAGCCAGAGTCAAAGCGCTGCTGCGCCGTGCAACCGGCATACCGCAAGCATTATTAAAATGCGGTCCCATTACAC
TGGATGTTACAGCCCAGTCGGTCACTGTCAACGGAGAAACCATCGAACTGACATCATTTGAATACCGCCTGCTGGAAGAA
TTGGTGCGCCACCATGGTGAGATTCTCTCCAAACACACACTGGCCGACTATCTTTATCCGCACGATGAAGACCGTGACAG
CAATGTTCTCGAAGTCATGGTCGGGCGTTTGCGCCGCAAACTGGATCCGAAGGGCACTCTGAATCCGATAGAAACCATGC
GTGGACGGGGATATCGCTTTACCCTGGAGTGCAACAAATCTTCATGA

Protein sequence : 
MRILVIEDEIKLQNQIRQQLESMGYMVDTCSDGEEGLFFATEYPLDAAIIDIGLPGKSGLEIIKALREQGSLLPILILTA
RSGWQDKVQGLEMGADDYLTKPFQMEELQARVKALLRRATGIPQALLKCGPITLDVTAQSVTVNGETIELTSFEYRLLEE
LVRHHGEILSKHTLADYLYPHDEDRDSNVLEVMVGRLRRKLDPKGTLNPIETMRGRGYRFTLECNKSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 1e-58 53
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator CP004022.1.gene1005. Protein 2e-48 45
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator CP000647.1.gene1136. Protein 2e-48 44
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator CP001918.1.gene2526. Protein 8e-49 44
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator CP001138.1.gene1939. Protein 3e-48 44
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator BAC0530 Protein 2e-48 44
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator NC_002695.1.913289.p Protein 1e-45 43
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator CP000034.1.gene2022. Protein 5e-47 43
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator BAC0083 Protein 1e-30 43
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator BAC0308 Protein 6e-30 43
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator BAC0638 Protein 6e-25 43
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 2e-26 42
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 2e-26 42
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 2e-26 42
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 2e-26 42
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 2e-26 42
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 2e-26 42
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 2e-26 42
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 2e-26 42
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator BAC0347 Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator VFG0475 Protein 2e-48 44
Nit79A3_2586 YP_004695752.1 winged helix family two component transcriptional regulator VFG0596 Protein 6e-27 41