Gene Information

Name : Nit79A3_2505 (Nit79A3_2505)
Accession : YP_004695674.1
Strain : Nitrosomonas sp. Is79A3
Genome accession: NC_015731
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 2673306 - 2675399 bp
Length : 2094 bp
Strand : -
Note : KEGG: afw:Anae109_2025 transketolase; TIGRFAM: Transketolase, bacterial-like; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal

DNA sequence :
ATGTTTGATAATGGACTTGACCAATTGGCTGTCAACACGATCCGGACATTGTCGATCGACGCCGTGCAGACCGCTAATTC
CGGTCACCCCGGCACCGCTATGGCGTTGGCGCCACTGGTCTATACCATTTGGAATCGTGTCATGGCGTTCGATCCTCAGG
ATCCGATCTGGCCCAATCGAGACCGGTTTGTGTTGTCGAACGGTCACGCTTCAATGCTGTTGTGGTCGGTGTTGCACCTG
TCGGGGACGCGTGCAGTCAATGCGGATTACGAAAAATTAGGGCAACTTTCTGTGACGCTGGAGGATATTCGCCGTTTCCG
CCAATTCGGCAGCAAGGCCCCCGGTCACCCTGAGTATCATTGGGTTTCTGGAGTAGAATCCACCACCGGTCCACTCGGGC
AAGGCATAGCAACCAGTGTTGGTATGGCTATCGCTGAAAAGTGGCTTGCAAGCCGCTATAACAAACCAGCTTTGAACATT
TTCGACTATAACATTTATGCCATCTGCAGTGATGGTTGCTTAATGGAAGGCGTGAGTTCGGAGGCAGCATCGTTGGCTGG
GCATCTTGCGCTTGATAACCTGTGCTGGATTTATGATAACAATCACATCACGATTGAGGGCAGTACACAAATTACGTTCA
CGGAAGATGTGGCGGCGAGATTTCTCAGCTATCACTGGAATGTTCTGCGTTTGAGTGATGCAAACGATATCGAGCAGATC
GATCAAGCCTTGCAGAAATTCCGGGAGACCAAAGGGAAGCCTACGCTGATCATTCTTGATAGTCACATTGGATACGGTTC
GCCCAATCGGCATGATACGGCTGCAGCGCATGGCGAGCCGCTTGGTTTAGACGAAATCCGTTTAACCAAGCGTGCCTACG
GTTGGCCTGAGGATGCGCAATTCCTGGTACCGGAAGGGGTGCGTGAGCACTTTGCTGCCGGTATTGGAAGACGTGGAGCA
GCGGCTCGTCAAGTATGGATAAATTTATTCAATGATTATCGTAACAAGTATCCTGAACTTACTACCGAAATTGATCAAAT
GCAGCATCGCGAATTGCCGGCCGAGTGGGATAACAACCTGCCGGTATTTCCGGAGGATCCAAAGGGGTTAGCAGGACGAG
AAGCTTCCGGTAAAGTGCTAAACGTATTGGCGCAGAATATTCCTTGGCTGCTTGGTGGATCTGCAGACCTAGGCCCATCA
ACCAAAACATTGTTGAATTATCTTGGTGCTGGCGATATTCAGGCTCAAACACCGGGGGGGAAGAATTTGCACTTCGGCAT
CCGAGAACACGCCATGTGCGCAATTTTGAACGGGCTTTCGTTATCCAAGTTACGGCCCTATGGTGCTACTTTCTTCATCT
TCAGCGATTACGCGCGACCAGCCATTCGTTTATCGGCGTTGATGGAACTGCCAACTATATTTATATTCACTCATGATGCC
ATGGGTGATGGAGAGGATGGTCCGACGCATCAACCGATCGAACAACTTGCTTCTTTGCGTGCCATTCCTGGTCTGACACT
TCTGCGGCCAGGCGATGCTAATGAAGTGGTCGAGGCCTATCGCGTTATCCTACAATTGCGTCATCGTCCGGCAGTTCTGG
TGCTTTCGCGTCAACCGCTTCCGACATTGAATCGCAATAAATATGCGCCCGCTTCGGGCGTAGCCAGCGGAGCTTATATA
CTGGCTGATACTCCGGGCGGCAAGCCCGATATAATACTTATCGCAACCGGCAGCGAAATCAGCCTTGCTGTACAAGCGCA
TGAAAAGCTCATTGCTGAAGGTATTCGCTCTCGTGTTGTATCCATGCCCTCATGGGATATCTTCGAGCACCAAACACAGG
AATACCGTGACAGCGTATTGCCTCCGGCGGTGAAGTCGCGGATCGCGATCGAGCAAGCGTCAACCTTCGGCTGGGAACGC
TATGTGGGTGATAGTGGCCGCATCATTGGTATGCAGACCTTTGGTGCTTCAGCTCCCTTGAAAGAGCTACAGAAAGAATT
CGGTTTCGAGCCTGAGCGGGTAGTAATAATTGCAAAAGAATTACTGGAAAAACAACAACTAGGTGGCAGTTGTCGCAGTT
TTTCAGATTACTGA

Protein sequence :
MFDNGLDQLAVNTIRTLSIDAVQTANSGHPGTAMALAPLVYTIWNRVMAFDPQDPIWPNRDRFVLSNGHASMLLWSVLHL
SGTRAVNADYEKLGQLSVTLEDIRRFRQFGSKAPGHPEYHWVSGVESTTGPLGQGIATSVGMAIAEKWLASRYNKPALNI
FDYNIYAICSDGCLMEGVSSEAASLAGHLALDNLCWIYDNNHITIEGSTQITFTEDVAARFLSYHWNVLRLSDANDIEQI
DQALQKFRETKGKPTLIILDSHIGYGSPNRHDTAAAHGEPLGLDEIRLTKRAYGWPEDAQFLVPEGVREHFAAGIGRRGA
AARQVWINLFNDYRNKYPELTTEIDQMQHRELPAEWDNNLPVFPEDPKGLAGREASGKVLNVLAQNIPWLLGGSADLGPS
TKTLLNYLGAGDIQAQTPGGKNLHFGIREHAMCAILNGLSLSKLRPYGATFFIFSDYARPAIRLSALMELPTIFIFTHDA
MGDGEDGPTHQPIEQLASLRAIPGLTLLRPGDANEVVEAYRVILQLRHRPAVLVLSRQPLPTLNRNKYAPASGVASGAYI
LADTPGGKPDIILIATGSEISLAVQAHEKLIAEGIRSRVVSMPSWDIFEHQTQEYRDSVLPPAVKSRIAIEQASTFGWER
YVGDSGRIIGMQTFGASAPLKELQKEFGFEPERVVIIAKELLEKQQLGGSCRSFSDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-131 46
tktA AAO17218.1 TktA Not tested tcd island Protein 7e-130 45