Gene Information

Name : Nit79A3_2375 (Nit79A3_2375)
Accession : YP_004695546.1
Strain : Nitrosomonas sp. Is79A3
Genome accession: NC_015731
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 2534969 - 2536384 bp
Length : 1416 bp
Strand : -
Note : KEGG: nit:NAL212_2313 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transductio

DNA sequence : 
ATGTCTATAGATATCGGATCAATTGTTAATCCACATAGAAAAACTACCGTTCCCAATATACTGATTGTGGACGATGAGCC
GGATATTATCGAGTTGCTCGAACTGACATTAGCACGTATGGGCATGGAAGTTTTCAGTGCAAAGTGTATCAGTGACGCCA
AGCTATTATTGCAATCACGTCAATTTCAGTTATGCCTCACGGACATGCGTTTACCTGATGGAGAAGGGTTAGATCTGGTT
AAATATATTGGGCAGCATTGCGCAGATTTGCCTGTTGCCGTGATAACAGCTTATGGTACTGCAGAAAATGCCGTCGCTGC
GCTTAAAGCCGGGGCTTTTGATTATTTACCGAAACCGGTTTCATTAAAGCAGTTGCGGGATTTAGTTAAATCAGCCCTAA
GCCTGCCGCCGATACAAACCGAATTGGCATCACAAACCCAATCGAATCAGCGCGTACTGTTGGGTGAATCCCAACCCATG
CGTCAGCTACGTGCAACCATAGACAAACTTTCCCGCAGTCAGGCTTCTGTTTATATCAGTGGTGAATCGGGAAGTGGAAA
GGAACTGGCAGCCAGAATGATTCATGAAAGAAGCGCTCGCCATAAACAAGCGTTTGTTGCTGTCAACTGTGGTGCTATCC
CTGAAAATTTGATGGAAAGTGAATTTTTTGGTTATAAAAAAGGTGCTTTCACCGGTGCAGAAAAAGAGCATGATGGATTT
TTCCTGACAGCAAATGGCGGTACGTTGTTTCTTGATGAAGTCGCTGATTTGCCATTGGCCATGCAAGTTAAGTTGCTTAG
GGTAATCCAGGAAAAACAAGTGAGAAGAATCGGTGATACGCAAGAAAAAAATATCGATGTGCGTATCATCAGCGCCACAC
ACAAGAAGCTTAGTGACTGTGTTGAGACCGGGCAATTCCGGCAGGATTTGTACTATCGTCTGAATGTAATCGAATTGAAC
ATACCTGCATTGCGTGAGATGCGCGAAGATATTCCGCTCATAGCAGAAGCAATTCTGGCAAAAATCTGCCGGGAATCCGC
ACGGCCCGTTTGTAATCTTAAGAAAGATGCCCTGGCATTGCTGATGAACTATGGTTATCCCGGAAATGTACGTGAGCTTG
AAAACATACTTGAACGGACATTGGCACTTTGCCCCGATACGCAGATTGGTAAAGAAGAGCTGCAATTACCCAATAAAGCC
AGAGAAATTCCACAAAATGCCGATAATTTGCCCATAATCAGTGCGGATCCAGGATTGCCGTTGCAGGATTTTCTTGATCA
GCTTGAAAGGGACTCTATTGTAAAAGCATTGGATCAGAGTCGATACAACCGAACAAAAGCAGCTAAAATATTGGGTATCA
CAGTCAGGTCGTTGCGCTATCGGATGGAACGATTGGGATTAAATGAAAAATCTTAA

Protein sequence : 
MSIDIGSIVNPHRKTTVPNILIVDDEPDIIELLELTLARMGMEVFSAKCISDAKLLLQSRQFQLCLTDMRLPDGEGLDLV
KYIGQHCADLPVAVITAYGTAENAVAALKAGAFDYLPKPVSLKQLRDLVKSALSLPPIQTELASQTQSNQRVLLGESQPM
RQLRATIDKLSRSQASVYISGESGSGKELAARMIHERSARHKQAFVAVNCGAIPENLMESEFFGYKKGAFTGAEKEHDGF
FLTANGGTLFLDEVADLPLAMQVKLLRVIQEKQVRRIGDTQEKNIDVRIISATHKKLSDCVETGQFRQDLYYRLNVIELN
IPALREMREDIPLIAEAILAKICRESARPVCNLKKDALALLMNYGYPGNVRELENILERTLALCPDTQIGKEELQLPNKA
REIPQNADNLPIISADPGLPLQDFLDQLERDSIVKALDQSRYNRTKAAKILGITVRSLRYRMERLGLNEKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 7e-101 45
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 7e-101 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nit79A3_2375 YP_004695546.1 Fis family transcriptional regulator BAC0089 Protein 9e-75 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nit79A3_2375 YP_004695546.1 Fis family transcriptional regulator VFG1214 Protein 2e-125 58