Gene Information

Name : Nit79A3_2298 (Nit79A3_2298)
Accession : YP_004695473.1
Strain : Nitrosomonas sp. Is79A3
Genome accession: NC_015731
Putative virulence/resistance : Unknown
Product : UMUC domain-containing protein DNA-repair protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0389
EC number : -
Position : 2458963 - 2460255 bp
Length : 1293 bp
Strand : -
Note : PFAM: DNA-repair protein, UmuC-like; KEGG: nit:NAL212_2528 DNA-directed DNA polymerase

DNA sequence :
ATGGATAAGCATAACCGCTCCATCGCGTTAATAGACGTGAATAACTTTTATGTCAGTTGCGAGCGGGTATTCAATCCCAA
ACTGGAAGACAAACCGGTTGTAGTGCTATCCAACAATGACGGTTGCGCGGTGGCCAGAAGCAACGAAGTCAAAGCGCTGG
GGGTAAAAATGGGGCAGCCATGGTTTCAGCTGAAAGATCTGGCCAAAAAACACGGAATCATTGTCTACTCATCGAACTAT
ACTTTGTATGCCGACATGAGCAATCGCGTCATGAGCATACTTGCAGTGTTTAGCCCAAACCAGGAAATTTATTCCATTGA
TGAATGCTTTCTTGATCTGACTGGATTCAAAAGACATAACCTGATTTGCTATGGCCAACATATTCGCCAGCGAGTAAAGC
AATGGACGGGCTTGCCGGTTTGTGTCGGAATTGGATCAACCAAGACGCTGGCCAAACTTGCCAATCATATTGCCAAGAAA
AATCCGGAATTCAATGGTGTGTGCGATTTGAATGCCATGTCACTCGGGCAACAAGATGAATGGTTCAGCAAAATAGAAGT
AGGGGAGATCTGGGGTATCGGCAGACGGCTTGCACCTAAACTTCAAGAAATAGGGATAAAAACCGTGCTGGATCTCAAAA
CAGCGTCGCCATCGCAATTGCGTACCCGCTTTTCGGTCGTGATGGAGAAAACCATTCGTGAGATCAATGGTACTGCCTGT
ATCGAACTGGAAGAAATCAATCCACCGAAAAAACAGATCGTCAGTTCCCGCTCCTTCGGCATTCCGGTATCCGATTTGGC
CAGTCTGGAAGAATCGGTTTCTCTCTACATTAGCCGTGCAGCAGAAAAACTGCGAAGGCAACAATCCTATGCCGGATCAG
TGCATGTGAGTATTCGCACCAGCCCATTCAAAGAAAAACAACCGTATTATGCCAACAGCATGACGATTGCGTTGCCGAGA
CAAACAGATGACACGAGATTACTAGCCAAAGTTGCACTATGGGGATTGCGCAAAATTTATCGCCGTGGTTATCGGTATCA
GAAAGCGGGTGTAATGTTGTCTGAACTGGTGCCAAGGCAATACCGGCAGCTGGATCTCTTTGGTTCGGTATCAGTAGCAG
ATAATCAATCCAGCAAGTTGATGAGTGTCATGGATCAAATCAATGCTCGTATGGGGCGGGGTACTTTAAAACTGGCATCT
GAAGGTTTTAAGCAACCCTGGAAGATGAAACAGGGAAATAAAAGTCCCAATTACACTACAAGCTGGGAGGAGTTGATTTG
TGTTATGAAATGA

Protein sequence :
MDKHNRSIALIDVNNFYVSCERVFNPKLEDKPVVVLSNNDGCAVARSNEVKALGVKMGQPWFQLKDLAKKHGIIVYSSNY
TLYADMSNRVMSILAVFSPNQEIYSIDECFLDLTGFKRHNLICYGQHIRQRVKQWTGLPVCVGIGSTKTLAKLANHIAKK
NPEFNGVCDLNAMSLGQQDEWFSKIEVGEIWGIGRRLAPKLQEIGIKTVLDLKTASPSQLRTRFSVVMEKTIREINGTAC
IELEEINPPKKQIVSSRSFGIPVSDLASLEESVSLYISRAAEKLRRQQSYAGSVHVSIRTSPFKEKQPYYANSMTIALPR
QTDDTRLLAKVALWGLRKIYRRGYRYQKAGVMLSELVPRQYRQLDLFGSVSVADNQSSKLMSVMDQINARMGRGTLKLAS
EGFKQPWKMKQGNKSPNYTTSWEELICVMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
samB NP_458681.1 UV protection protein Not tested SPI-7 Protein 1e-85 47
umuC NP_807889.1 DNA polymerase V subunit UmuC Not tested SPI-7 Protein 1e-85 47
rulB CAI36137.1 nucleotidyltransferase/DNA polymerase Not tested PPHGI-1 Protein 2e-89 46
unnamed ABR13403.1 DNA-directed DNA polymerase Not tested PAGI-5 Protein 2e-67 45