Gene Information

Name : Nit79A3_1682 (Nit79A3_1682)
Accession : YP_004694896.1
Strain : Nitrosomonas sp. Is79A3
Genome accession: NC_015731
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1799354 - 1800037 bp
Length : 684 bp
Strand : -
Note : KEGG: nit:NAL212_1954 phosphonate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGATCCGCCTGACAGCCATTACCCGCACATTTCACATGGGTGACCAGGCGGTTTATGCACTCAATAACATCAATCTGCA
TATCGCTGCAGGTGAGTATGTTTCGATCATGGGTCCTTCCGGCTCCGGGAAATCCACGCTGCTGAATATTATCGGTTTGC
TGGATAAACCCGATAGCGGTAGCTATGAATTGGATGACCGGCTGATTACCGATCTGTCGGAAACGGAGCAGGCGCAAATC
CGCCGGGAAAAAATCGGTTTTGTTTTTCAATCGTTCCACCTGGTTCCTCGCTTAACGGCTGCAGAAAATATCGAATTACC
TTTGATTCTAAGCGGCATGCCATCTGCGCAACGCCAAAACCTTGTGAATGATGCCTTGCAAGCATTTGAGCTTAAAGAAC
GTGCACATCACCGTCCAGCCGAACTTTCCGGCGGGCAGCGTCAGCGTGTGGCGATTGCGCGTGCCACGATTATGCATCCC
AGCGTCATTCTGGCCGATGAGCCCACCGGCAATCTGGATCACCAGATCGGCGCTGAAGTCATGCTGCTGCTGGAAAATCT
GCATCACACGGGCACCACGCTGATTGTCGTCACGCACGATCGTGAATTGGGTTCGCGCGCGCATCGCCAAATCGGCATGC
GCGACGGAAAGATATTGACGGATCAAGCCGATGACACTCACTGA

Protein sequence : 
MIRLTAITRTFHMGDQAVYALNNINLHIAAGEYVSIMGPSGSGKSTLLNIIGLLDKPDSGSYELDDRLITDLSETEQAQI
RREKIGFVFQSFHLVPRLTAAENIELPLILSGMPSAQRQNLVNDALQAFELKERAHHRPAELSGGQRQRVAIARATIMHP
SVILADEPTGNLDHQIGAEVMLLLENLHHTGTTLIVVTHDRELGSRAHRQIGMRDGKILTDQADDTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nit79A3_1682 YP_004694896.1 ABC transporter NC_008702.1.4606598. Protein 3e-64 65
Nit79A3_1682 YP_004694896.1 ABC transporter NC_012469.1.7686878. Protein 9e-57 53
Nit79A3_1682 YP_004694896.1 ABC transporter CP001581.1.gene798.p Protein 8e-41 46
Nit79A3_1682 YP_004694896.1 ABC transporter CP001581.1.gene598.p Protein 2e-35 42