Gene Information

Name : Nit79A3_1498 (Nit79A3_1498)
Accession : YP_004694728.1
Strain : Nitrosomonas sp. Is79A3
Genome accession: NC_015731
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1599654 - 1599836 bp
Length : 183 bp
Strand : -
Note : PFAM: Prophage CP4-57 regulatory; KEGG: nit:NAL212_2044 phage transcriptional regulator, AlpA

DNA sequence :
ATGAAGTTTGTAAAACTAGAGACCGTGAAATCAATGACTGGTCTATCGAGAAGCTCAATATACCAGCTCATCAATGAAGG
AAGGTTTCCCAATCAGGTAAATTTAGGATCGAGATCCGTTGCCTGGGTTGCAAGTGAGATCGAAGATTGGATGAATAACT
GCATAGCAAATAGAAGTATCTAA

Protein sequence :
MKFVKLETVKSMTGLSRSSIYQLINEGRFPNQVNLGSRSVAWVASEIEDWMNNCIANRSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 7e-12 50
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 2e-13 50
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 3e-13 50
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 3e-13 50
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 1e-12 47
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 2e-12 47
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 2e-12 47
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 9e-07 44
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 1e-08 43
unnamed CAA21398.1 - Not tested HPI Protein 2e-08 43
Z1627 NP_287131.1 hypothetical protein Not tested TAI Protein 2e-05 41
Z1188 NP_286723.1 hypothetical protein Not tested TAI Protein 2e-05 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nit79A3_1498 YP_004694728.1 phage transcriptional regulator AlpA VFG1118 Protein 9e-14 50
Nit79A3_1498 YP_004694728.1 phage transcriptional regulator AlpA VFG1141 Protein 7e-13 47