Gene Information

Name : Nit79A3_1318 (Nit79A3_1318)
Accession : YP_004694552.1
Strain : Nitrosomonas sp. Is79A3
Genome accession: NC_015731
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1443377 - 1444063 bp
Length : 687 bp
Strand : +
Note : KEGG: nit:NAL212_1097 phosphonate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGTCAGATAACTTTATTAAACAACCCATTCTTTGGACCAAAGCACTTACTAAGCAGGTTAATACCGGCGACAAACAATT
AACCATATTGCAGGATATCGATTTGCAGGTTAACGCCGGTGAGGCCGTTGCAATTATAGGCGCATCCGGTTCAGGTAAAT
CTACTTTATTAGGGCTACTGGCAGGATTGGATTTGCCGACGTCTGGGAAAGTTCACCTGGATGCAATTGATATTTTTACT
CTGGATGAAGATAGCCGGGCTGCCTTGCGCGGCAAAATTCTGGGTTTTGTATTTCAGTCATTTCAATTACTTCCTGCATT
GACTGCGATTGAAAATGTGATGTTGCCGCTTGAACTCTCTGCAGCCGGAAACGCTGAAACAACGGCGCGTAGATTACTGG
AACGCGTTGGATTGTCCATGCGCTTGCATCATTATCCGAAACAGTTATCCGGAGGAGAGCAGCAGCGAGTTGCTATTGCA
CGAGCATTTGCAACGGATCCCAAGTTATTGCTGGCCGATGAACCCACGGGAAATCTCGATTCCGCCACCGGAATACAAAT
TATTGAGCTCATGTTCGAACTTAATCGTGAACATGGCACGACATTGGTTTTGGTTACCCATGATGAAGCCCTGTCACGGC
GTTGTTCGCGCCAAATCCGATTGGCGGATGGCAAGCTTGTGCAATAA

Protein sequence :
MSDNFIKQPILWTKALTKQVNTGDKQLTILQDIDLQVNAGEAVAIIGASGSGKSTLLGLLAGLDLPTSGKVHLDAIDIFT
LDEDSRAALRGKILGFVFQSFQLLPALTAIENVMLPLELSAAGNAETTARRLLERVGLSMRLHHYPKQLSGGEQQRVAIA
RAFATDPKLLLADEPTGNLDSATGIQIIELMFELNREHGTTLVLVTHDEALSRRCSRQIRLADGKLVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-22 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-24 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-24 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-24 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-24 42
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 5e-11 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nit79A3_1318 YP_004694552.1 ABC transporter NC_008702.1.4606598. Protein 9e-34 52
Nit79A3_1318 YP_004694552.1 ABC transporter NC_012469.1.7686878. Protein 7e-33 47
Nit79A3_1318 YP_004694552.1 ABC transporter CP001581.1.gene798.p Protein 2e-31 43
Nit79A3_1318 YP_004694552.1 ABC transporter NC_012469.1.7685735. Protein 8e-29 42