Gene Information

Name : Nit79A3_0127 (Nit79A3_0127)
Accession : YP_004693433.1
Strain : Nitrosomonas sp. Is79A3
Genome accession: NC_015731
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 150962 - 151918 bp
Length : 957 bp
Strand : +
Note : TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: nit:NAL212_0448 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase

DNA sequence : 
ATGCCCAATTCACTTTTATATCCCCAGAAAATCGTCATTGCATCACGTGAAAGCCTGCTTGCAATGTGGCAAGCTAAGTT
TATTCAGAAATGTTTAGGCGAATTATACCCGCAAACTGAAGTCAGCATACTCGGCATGACAACGCGCGGCGATCAAATAC
TGGACCAGTCATTATCAAAAATAGGCGGGAAGGGTTTGTTCATCAAGGAACTGGAGCAAGCTTTAGAAGATGGACGCGCC
GATATCGCGGTGCATTCGATGAAAGATATGCCCATGAATGTGCCCGAGGGATTCAAGCTTGCTGCCATCACGGAACGGGA
AGATCCTCGCGATGCTTTTGTTTCCAATCAATATGTTAATCTGGATACGCTGCCAGAAGGCAGTGTCGTGGGTACATCAA
GCCTGCGGCGAGAAAGTCAATTGCGTGCTCGTTTTCCTTATCTTCAAGTACAGCCATTGCGCGGCAATGTGCAAACCCGG
TTACGTAAACTCGATGAGGGGCAGTATGCTGCAATCATACTTGCTGCGGCTGGTTTAAAACGGCTTGGATTATCTGATCG
CATCACAGCACTGCTGAATCCTGAGCAAAGCTTACCGGCGGTGGGGCAAGGTGCTTTGGGTATCGAATGCCGGGCTGATC
GCATAGATTTGGTTGAGCTAATGCAACCTTTGCATCACCAGCCAACGGCCTTTTGTGTTGAAGCAGAACGAGCCTTAAGT
CGCGTATTGGGAGGTAGTTGCCAGGTACCATTGGGAGCATTTGCTGAAATTATCGATGGCATACTCGAGTTACGTGGATT
CGTTGCGCAACCCGATGGCAAACGCATTGTCAGTGGCGCATTGAATGGCAAACCAGAAACTGGTATTGCTATCGGGCAAC
AATTGGCTAAAAAGCTAATAACAGAAGGCGCTGATGAAATCTTGGCAACACTGGTCCCTGCAGAAGGTTGGAAATAG

Protein sequence : 
MPNSLLYPQKIVIASRESLLAMWQAKFIQKCLGELYPQTEVSILGMTTRGDQILDQSLSKIGGKGLFIKELEQALEDGRA
DIAVHSMKDMPMNVPEGFKLAAITEREDPRDAFVSNQYVNLDTLPEGSVVGTSSLRRESQLRARFPYLQVQPLRGNVQTR
LRKLDEGQYAAIILAAAGLKRLGLSDRITALLNPEQSLPAVGQGALGIECRADRIDLVELMQPLHHQPTAFCVEAERALS
RVLGGSCQVPLGAFAEIIDGILELRGFVAQPDGKRIVSGALNGKPETGIAIGQQLAKKLITEGADEILATLVPAEGWK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-72 54
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-72 54