Gene Information

Name : Nit79A3_1225 (Nit79A3_1225)
Accession : YP_004694468.1
Strain : Nitrosomonas sp. Is79A3
Genome accession: NC_015731
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 1345833 - 1346327 bp
Length : 495 bp
Strand : +
Note : KEGG: nit:NAL212_1911 redoxin domain-containing protein; HAMAP: thiol peroxidase; PFAM: Redoxin

DNA sequence : 
ATGGTTACTCTTAAAGGAAAGCCCATCAAAATTGAAGGTACTTTTCCCAAAGTCGGACAGAAAGCGCCGGCGCTTTCTCT
CGTGAACAGGGATTTGGCTGATGTTACTTTGGCTAATTTTGCCGGCAAAAAGAAAGTGCTGAATATTGTTCCTAGCTTGG
ATACGCCAGTATGCGCGATCTCGACACGAAAATTTAATCAGCAAGCTAGCAATATGGACAATACAGTTGTGTTGATCATC
GCTGCTGACTTACCTTTTGCTATGAGCCGCTTCTGCGATGCCGAAGGACTGGATAAGGTGATTACACTTTCAACTATGCG
TGGTGCAAATTTCATGAAGGATTACGGCGTTTTCATAGCAGATAGTCCATTTGCTGGAATTACAGCACGTGCGGTCATTG
TTCTGGACGAATCGGATACCATCATCCATGCTGAACTGGTTCCTGAAATTGCTGATGAACCGAATTACGAAGCAGCCTTA
GCTGCCTTAAAATAA

Protein sequence : 
MVTLKGKPIKIEGTFPKVGQKAPALSLVNRDLADVTLANFAGKKKVLNIVPSLDTPVCAISTRKFNQQASNMDNTVVLII
AADLPFAMSRFCDAEGLDKVITLSTMRGANFMKDYGVFIADSPFAGITARAVIVLDESDTIIHAELVPEIADEPNYEAAL
AALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 9e-33 44
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-32 44
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 6e-33 44
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-32 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nit79A3_1225 YP_004694468.1 thiol peroxidase VFG0087 Protein 3e-33 44