Gene Information

Name : Nit79A3_1027 (Nit79A3_1027)
Accession : YP_004694289.1
Strain : Nitrosomonas sp. Is79A3
Genome accession: NC_015731
Putative virulence/resistance : Unknown
Product : transposase IS4 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3039
EC number : -
Position : 1126116 - 1127078 bp
Length : 963 bp
Strand : +
Note : PFAM: Transposase, IS4-like; KEGG: tgr:Tgr7_1308 ISRSO18-transposase

DNA sequence :
ATGAAACAATTAGTATTGTCGATTCCATTATTTATCAAGAAACCAAAAGTAACTCGCCGGCAAAAGTTTCTCGAAGAAAT
GGAGCAAGTGGTTCCATGGGTAGACTGGACGAATCGGATCGCGCCGCACTATCCGGTAGCAGGTTTGGGACGCAAGCCAT
TTGCGTTGGAAGCGATGCTGCGGATTCATATGATGCAGCAATGGTTTGGTTATTCAGATCCGGCAATGGAAGAAGCGTTA
CATGATGTGCCGATGCTACGTGAATTTGCAGGACTAGATGCGGGAGAAGATGTTATGCCTGATGAGACGACGATCCTCAA
GTTTCGCCACCTGCTGGAGAAGCATCACTTGGCACAAAGCCTGTTTGCTGAAACAACTGGGCGGTTAGCGCAACAGGGAT
TATTGCTGCGTCAGGGCACGATAGTTGACGCCACGCTGATAGCGGCTGCGCCATCGACCAAGAACCGGCAACGCAAACGT
GATGGCGAGATGAGTTCGACTAAGAAAGGCAACAACTATTACTTTGGATTAAAAGCACACATAGGCGTAGATGCCGATTC
CGGCCTGGTGCATAGCCTGGAAATTACCACGGCCAAAGTGGCCGATGGCAACATGATTGATGCGCTGGTACATGGCGAAG
AGGCAATTGTATTGGGTGATCGGGCTTATACTCGTAATGATCGCAATCTGGAAGCGCAACGACAGCCGGAAGAGCCGGTC
TGGGGTATGCCATTCAAACGCAAGCGCGGTGAGGAATTGCCAGCAGAACATGCCGTGCTCAATCGTATGCTAGCTTCACT
ACGCGCAAAGGTTGAACATCCGTTTCGTATTGTCAAAAGACAATTTGGTTATACCAAAGTCCGTTACCGAGGATTGTTCA
AGAATGCACAACAGCTTTATCTGTTGTTTGCCTTGGCTAATCTTTACCATGTCCGTAAGGTGTGGATGCCAACCACGGGA
TAA

Protein sequence :
MKQLVLSIPLFIKKPKVTRRQKFLEEMEQVVPWVDWTNRIAPHYPVAGLGRKPFALEAMLRIHMMQQWFGYSDPAMEEAL
HDVPMLREFAGLDAGEDVMPDETTILKFRHLLEKHHLAQSLFAETTGRLAQQGLLLRQGTIVDATLIAAAPSTKNRQRKR
DGEMSSTKKGNNYYFGLKAHIGVDADSGLVHSLEITTAKVADGNMIDALVHGEEAIVLGDRAYTRNDRNLEAQRQPEEPV
WGMPFKRKRGEELPAEHAVLNRMLASLRAKVEHPFRIVKRQFGYTKVRYRGLFKNAQQLYLLFALANLYHVRKVWMPTTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 2e-55 55
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 3e-55 55
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 5e-69 52
unnamed AAO33449.1 putative transposase Not tested Not named Protein 1e-45 50
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 1e-48 45
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 1e-48 45