Gene Information

Name : ureC1 (RLO149_c006440)
Accession : YP_004689635.1
Strain : Roseobacter litoralis Och 149
Genome accession: NC_015730
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0804
EC number : 3.5.1.5
Position : 670748 - 672457 bp
Length : 1710 bp
Strand : -
Note : -

DNA sequence :
ATGCCCACCAATATCCCCCGCACCAACTACGCTGCCATGTTCGGCCCCACCACCGGCGACAAGGTGCGTCTTGCTGACAC
CGACCTCATCATCGAGGTTGAGCGCGACCACACCATCTATGGCGAGGAGGTTAAATTTGGCGGCGGCAAGGTGATCCGCG
ACGGGATGGGACAGTCTCAGGTCACGCGCGCGGAAGGGGCCATGGACACGGTCATCACCAACGCGCTGATCGTGGATCAC
ACGGGCATCTACAAGGCAGATGTCGGCCTGCGCGACGGGCGCATTGCCAAGATCGGCAAGGCGGGTAACCCCGACACGCA
ACCGGGTATAGACATCATTATCGGCCCCTCGACCGAGGCCATCGCGGGCGAGGGCAAGATCCTGACAGCGGGCGGGTTCG
ACAGCCATATCCACTTTATCGCGCCGCAGCAGATCGACGACGCGCTGCACTCTGGCATCACCACGATGCTGGGCGGTGGC
ACCGGTCCTGCGCATGGCACGCTGGCCACCACCTGCACACCGGGGTCTTGGCACATCGGGCGGATGTTGCAGGCGTTGGA
TGCCTTCCCCATGAACTTCGGCATCTCGGGCAAAGGGAACGCGTCGCAACCGGCGGCCCTCGTCGAGATGATCGAAGGCG
GGGCCTGCGCGATGAAGCTGCACGAGGATTGGGGCACGACACCGGGGGCCATCGACTGCTGCCTGTCCGTGGCCGACGAC
ATGGACGTGCAGGTGATGATCCACACCGATACGCTTAATGAGTCCGGGTTCGTCGAAAACACGGTGGCCGCCATCAAAGG
CCGCACGATCCACGCCTTTCACACCGAGGGCGCGGGCGGCGGGCATGCCCCGGATATCATCAAGATCTGTGGCGACGCGA
ATGTGATCCCCTCTTCCACCAACCCGACGCGGCCCTTCACGGTGAACACGTTGGAAGAGCATCTTGATATGTTGATGGTG
TGCCACCACCTCGACAAATCCATCCCCGAAGACGTGGCCTTTGCCGAAAGCCGCATCCGCCGCGAAACCATCGCCGCCGA
AGACATCCTGCACGATATGGGCGCGTTTTCCATCATCGCCAGCGACAGTCAGGCCATGGGTCGGGTGGGCGAAGTCATCA
TCCGCACATGGCAAACCGCCGACAAGATGAAGAAACAGCGCGGCGCATTGGTCGAGGAAACAGGCGACAACGACAATATG
CGCGTGCGCCGCTACATCGCGAAGTATACAATTAACCCGGCGATTGCCCACGGCATCAGCCACGAGATCGGCAGCATCGA
GGTCGGCAAACGCGCTGATCTGGTGCTGTGGAACCCTGCGTTCTTTGGCGTGAAACCCGAAATGGTACTGATGGCAGGCA
CCATCGTCTGCGCGCAGATGGGCGACACCAATGCCTCCATCCCCACACCGCAGCCCGTGTATTCGCGCCCCATGTTCGGG
GCCTTTGGGCGGTCGGTCGAACACTCCGCCGTAACCTTTGTCAGCGAAGCGGCTCAGACGGCGGGCATCGGCGAGACGCT
GGGCCTGCGCAAAGAAACACTCGCCGTAAAGGGCACGCGCGGGATCGGCAAAAAAGACCTGATCCTGAACGACGCCCTGC
CCCATATCGAGGTGAACCCCGAAACCTACGAGGTCCGCGCCGATGGTGAACTCCTCACCTGCCAACCCGCCGAGGTGCTG
CCGATGGCGCAGCGGTATTTTCTGTTTTGA

Protein sequence :
MPTNIPRTNYAAMFGPTTGDKVRLADTDLIIEVERDHTIYGEEVKFGGGKVIRDGMGQSQVTRAEGAMDTVITNALIVDH
TGIYKADVGLRDGRIAKIGKAGNPDTQPGIDIIIGPSTEAIAGEGKILTAGGFDSHIHFIAPQQIDDALHSGITTMLGGG
TGPAHGTLATTCTPGSWHIGRMLQALDAFPMNFGISGKGNASQPAALVEMIEGGACAMKLHEDWGTTPGAIDCCLSVADD
MDVQVMIHTDTLNESGFVENTVAAIKGRTIHAFHTEGAGGGHAPDIIKICGDANVIPSSTNPTRPFTVNTLEEHLDMLMV
CHHLDKSIPEDVAFAESRIRRETIAAEDILHDMGAFSIIASDSQAMGRVGEVIIRTWQTADKMKKQRGALVEETGDNDNM
RVRRYIAKYTINPAIAHGISHEIGSIEVGKRADLVLWNPAFFGVKPEMVLMAGTIVCAQMGDTNASIPTPQPVYSRPMFG
AFGRSVEHSAVTFVSEAAQTAGIGETLGLRKETLAVKGTRGIGKKDLILNDALPHIEVNPETYEVRADGELLTCQPAEVL
PMAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 0.0 67
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 0.0 67
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-165 61
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 5e-166 61
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 5e-166 61
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 5e-166 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC1 YP_004689635.1 urease subunit alpha VFG0270 Protein 2e-170 65