Gene Information

Name : fliQ (RLO149_c043410)
Accession : YP_004693200.1
Strain : Roseobacter litoralis Och 149
Genome accession: NC_015730
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 4396137 - 4396406 bp
Length : 270 bp
Strand : +
Note : -

DNA sequence :
ATGGCCGATCAAATCATCTTCTTTGATACCTTACGGCATGGCCTGTGGATCGCGGTATTGATCTCAATACCAGTGTTGAC
CGCAGCTTTGGTCACCGGTGTATCCATTGGCTTGGTGCAAGCACTTACCTCCATTCAGGAGATGACACTTACCTTCGTGC
CGAAACTCGCGGCCATCGTCCTCGTGTTCTGGATGTCGATGGGCTTCATGACACAAACTCTTGTGTCGTTCTTTCACGAG
CAAATCATCCCACTGATTGTAGGAGGCTAA

Protein sequence :
MADQIIFFDTLRHGLWIAVLISIPVLTAALVTGVSIGLVQALTSIQEMTLTFVPKLAAIVLVFWMSMGFMTQTLVSFFHE
QIIPLIVGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaS YP_216428.1 secretion system apparatus protein SsaS Virulence SPI-2 Protein 0.026 41
ssaS NP_460385.1 type III secretion system apparatus protein Virulence SPI-2 Protein 0.026 41
ssaS NP_456108.1 putative type III secretion protein Virulence SPI-2 Protein 0.025 41
ssaS NP_805091.1 type III secretion protein Virulence SPI-2 Protein 0.025 41
ssaS CAA68200.1 secretion system apparatus, SsaS Virulence SPI-2 Protein 0.018 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliQ YP_004693200.1 flagellar biosynthetic protein FliQ VFG0520 Protein 0.007 41