Gene Information

Name : rph (RLO149_c041750)
Accession : YP_004693034.1
Strain : Roseobacter litoralis Och 149
Genome accession: NC_015730
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 4220502 - 4221215 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence :
ATGCGTCCCTCTGGTCGAGAACTGAACGAAATGCGCGCCGTTTCTATTGAAACGGGTTTCACCAAGCACGCCGAAGGGTC
GGCGCTGATCAAAATCGGGGATACCCATGTTTTGTGTACAGCTACGATTGAAGACCGCGTGCCACCTTTCATCAAGGGAT
CCGGTTTAGGTTGGGTCACGGCAGAGTATGGCATGCTGCCACGGGCGACGAACACGCGGATGCGGCGCGAATCCACGGCG
GGCAAGCAAGGTGGGCGTACCGTTGAAATTCAGCGTCTGATCGGGCGCAGCCTGCGCGCCGGTGTTGATCGTGTTGCCTT
GGGCGAACGTCAGATCACGGTGGATTGCGATGTTTTACAGGCGGATGGCGGCACGCGCTGCGCCTCTATCACAGGTGGCT
GGATCGCACTGCGTCTGGCGGTCAACAAACTGATGAAAGCGGGCGATGTGATCAGTGATCCGCTGGTTGATCCGGTCGCT
GCGATCAGCTGTGGCATTTATGCAGGTCAGCCCGTCATGGACCTGGATTACCCCGAAGATTCAGAAGCTGGCGTGGACGG
TAACTTTATCATGACCGGCACAAAACGGCTGATCGAAGTGCAAATGAGCGCCGAAGGGTCCACCTTTTCACGCGATCAGA
TGAACCAGTTGATGGATTTGGCTGAAAAAGGCGTCGGGGAACTGGTGACCGCGCAACGCGCTGCGACTGCATGA

Protein sequence :
MRPSGRELNEMRAVSIETGFTKHAEGSALIKIGDTHVLCTATIEDRVPPFIKGSGLGWVTAEYGMLPRATNTRMRRESTA
GKQGGRTVEIQRLIGRSLRAGVDRVALGERQITVDCDVLQADGGTRCASITGGWIALRLAVNKLMKAGDVISDPLVDPVA
AISCGIYAGQPVMDLDYPEDSEAGVDGNFIMTGTKRLIEVQMSAEGSTFSRDQMNQLMDLAEKGVGELVTAQRAATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-50 51