Gene Information

Name : RLO149_c039320 (RLO149_c039320)
Accession : YP_004692797.1
Strain : Roseobacter litoralis Och 149
Genome accession: NC_015730
Putative virulence/resistance : Virulence
Product : response regulator receiver protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3984124 - 3984810 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence :
ATGGCACAGTTAAAGAAAATCCTGTTGGTAGATGATGATGATGATCTGCGCGACGCGCTGAGCGAACAGTTGATCATGAC
CGAAGACTTTGATGTCTTTGAAGCGGCAAACGGCGCGGATGCGATGGTGCGCGCCAAGGAGGCGCTCTATGATCTTGTGA
TCCTTGATGTGGGGCTGCCAGATACGGACGGTCGCGAATTATGCCGTTTGATGCGCAAGCAAGGTGTGAAAAGCCCGATT
CTGATGCTGACCGGGCACGATAGTGATGCTGATACGATTTTGGGTCTGGATGCCGGCGCCAATGATTATGTCAGCAAACC
CTTCAAATTTCCCGTGCTGTTGGCGCGGATACGCGCGCAACTCAGACAGCATGAGCAGTCAGAAGACGCGGTGTTCCAGC
TTGGGCCCTATACATTCAAGCCTGCGATGAAAACGCTGATTACCGAAGACGAAAAGAAAATTCGCCTGACGGAAAAGGAA
ACCAATATTCTGAAATTCCTCTATCGCTCGACCGAGGGTGTGGTGGCGCGCGATGTTCTTTTGCACGAGGTCTGGGGATA
TAATGCCGGGGTCACAACGCATACGTTGGAGACGCATATTTACCGTTTGCGTCAGAAAATTGAACCGGACCCGTCAAATG
CGCGTCTGCTGGTTACAGAATCTGGTGGATACAGACTAATGGCTTAA

Protein sequence :
MAQLKKILLVDDDDDLRDALSEQLIMTEDFDVFEAANGADAMVRAKEALYDLVILDVGLPDTDGRELCRLMRKQGVKSPI
LMLTGHDSDADTILGLDAGANDYVSKPFKFPVLLARIRAQLRQHEQSEDAVFQLGPYTFKPAMKTLITEDEKKIRLTEKE
TNILKFLYRSTEGVVARDVLLHEVWGYNAGVTTHTLETHIYRLRQKIEPDPSNARLLVTESGGYRLMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-24 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RLO149_c039320 YP_004692797.1 response regulator receiver protein VFG0596 Protein 3e-24 42