Gene Information

Name : hemC (RLO149_c034980)
Accession : YP_004692401.1
Strain : Roseobacter litoralis Och 149
Genome accession: NC_015730
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 3550640 - 3551584 bp
Length : 945 bp
Strand : +
Note : -

DNA sequence :
ATGACAGTAAAGCTTCCTTCCCCCGACTCGCCCCTCAAAATCGGCACCCGTGGCTCGCCCTTGGCGATGGCTCAGGCGTT
TGAAACCCGTGCGCGCCTGATGCAAGCCTTTGATTTACCTGAGGATGCCTTCTCCATCGTTGTGATCAAAGTCACCGGTG
ACATGATTCAGGATCGCGCGCTGAAAGACATCGGTGGCAAGGGCCTTTTCACCCGTGAAATCGAAGAAGATCTGCTGTCA
GAAAAAATTGACATCGCGGTGCATTCGATGAAGGACATGCCGACACTGCAACCGGACGGGCTGGTCCTTGACACCTATCT
GCCGCGCGAGGATGTGCGTGATGCGTTTGTATCCCCCACACTGAGCGGTATCGCTGATCTGGCGCAGGGCGCGGTGGTTG
GCACCTCAAGTCTGCGGCGCAAGGCACAGCTGCTCAACCGTCGCCCGGACCTGAATGTGGTCGAATTTCGCGGCAATGTG
CAGACGCGGCTGAAAAAGCTGGCCGATGGGGTGGCGGAATGTACCTTTCTGGCCTCTGCTGGCCTGAACCGGCTGAAAAT
GGACGAGGTGCCAGCAACGCCGATTGAGGCGGATGAAATGCTGCCTGCCGTTGCACAGGGGGCCATTGGCATCGAACGCC
GGATGGCGGATCAAAACACCGCTGATTTACTAAGCGCAATCCATCACATTGAAACCGGCCAGCGTCTGACGGCGGAGCGG
AGCTTCCTGCTGACGCTCGACGGGTCATGTGAAACGCCCATCGCGGGCTTGGCTGAACTTGATGGTGATCAGCTGCGGCT
GCGCGGTGAAGTGCTGCGGCCAGACGGATCGGAGTCTCTGGCGGGCGAACGCAGCGGCCCAATTGCGGACGGCGCAGAAA
TGGGGCGCATACTTGCGCAGGAACTTCTGGACCGTGCCGGGCCCAAGTTTTTCGAGTGGCATTGA

Protein sequence :
MTVKLPSPDSPLKIGTRGSPLAMAQAFETRARLMQAFDLPEDAFSIVVIKVTGDMIQDRALKDIGGKGLFTREIEEDLLS
EKIDIAVHSMKDMPTLQPDGLVLDTYLPREDVRDAFVSPTLSGIADLAQGAVVGTSSLRRKAQLLNRRPDLNVVEFRGNV
QTRLKKLADGVAECTFLASAGLNRLKMDEVPATPIEADEMLPAVAQGAIGIERRMADQNTADLLSAIHHIETGQRLTAER
SFLLTLDGSCETPIAGLAELDGDQLRLRGEVLRPDGSESLAGERSGPIADGAEMGRILAQELLDRAGPKFFEWH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 4e-50 47
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 4e-50 47