Gene Information

Name : ureC2 (RLO149_c028340)
Accession : YP_004691757.1
Strain : Roseobacter litoralis Och 149
Genome accession: NC_015730
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0804
EC number : 3.5.1.5
Position : 2892088 - 2893797 bp
Length : 1710 bp
Strand : +
Note : -

DNA sequence :
GTGAAGATGACGCGTTCAGAATACGCCGCGATGTTCGGGCCCACCACGGGCGATATGATCCGGCTTGGTGATACCGAGCT
TTGGGCCGAGATCGAGCACGATTACACCCATTACGGCGACGAATGCCTGCATGGCGGCGGCAAGACCCTGCGCGATGGAT
TGGGGATGGCCGTGGGCGTGACCAGTGCTGGTGGATCGCTTGATATGCTGATCTGCAACGTGGTCGTGATCGATGCTATG
GCCGGGATCGTGAAAGGTGATATCGGCATCAAAGACGGCAAGATTGTCGCCATCGGCAAGGCCGGAAACCCCGCCACGAT
GGATGGTGTGGACCCTCGATTGATCGTCGGAGCCGGAACGACCGTGCGCGATGCCGAAGGCATGATCGCCACGGCGGGTG
CCATCGACGTGCATGTCCATTTCGACAGCGCACAGCTTGTGGAACATGCGATTTCATCGGGGATCACCACAATGCTGGGT
GGGTCTTTGGGGCCCATCACTGTCGGGATCGATTGTGGCGGCGTGTTCAACACCGGCAAAATGCTGCAGGCGGCTGAACA
CTGGCCGATGAATTTTGGATTTCTGGGGCGCGGCAATGCCCATGAACCCGACGCGATGGTCGAACAGATCGAAAACGGTT
GTCTGGGACTGAAGATCCACGAGGATTGGGGCTCGATGCCGGCGGCAATTGACGCCTGCCTGACCGTTGCGGACGAGCTG
GATTTTCAGGTTCAAATCCACACCGATACGCTGAACGAAAGCGGGTTTGTCGAAGACACGCTTGCGGCCATCGGGGATCG
CACGATTCACATGTATCACACCGAAGGGGCTGGCGGTGGCCACGCGCCGGACATCATAACTGTGGCGGGTCTTTCAAACT
GTCTGCCGTCCTCCACCAACCCGACCAACCCCTTCACCATCAATACGTTCGACGAACATCTTGATATGACGATGGTGTGC
CACCACCTCAATCCGTCGATCCCTGAGGATGTGGCCTTTGCCGAAAGCCGCATTCGCGCGCAGACCATCGCCGCCGAGGA
CGTGCTGCACGATTTTGGCGCGATATCGATGTTGGGCTCTGACAGTCAGGGGATGGGCCGGATCCACGAGGTAATCACGC
GCACATGGCAGCTTGCCTCCAAGATGCGCGTCCAGCGCGGACGCCTGCCTGAAGAGACGGTTGCCAAAGGCGACAACCAT
CGGATCAAACGCTACATCGCCAAATATACGATCAACGCGGCAAGGTCTTTCGGAATTGCCGACCATATCGGCTCGATTGA
GCCGGGTAAGATGGCGGATATCGTGCTGTGGAAGCCGGGGTACTTCGGCATCAAGCCCGAATTGGTGATCAAGGGCGGCT
TTATCGCCTGGGGTTCGATGGGCGACAGCGCGGCATCCTTGATGACCTGCGAGCCGTTGATCATGCGCCCGCAATGGGGG
TCATTCGGCAAGGCGGCCCAAGCCTGTGGCGCGTGTTTCGTGAACCCCCGTGCCATCGATGGCGGGGTATCGGAACGGCT
GGGCTTGACCAAGCAACTCTTGCCCGCACAGGGCACCCGCACTTTGCGCAAATCCGACATGTTTCTGAACGATGCCTGTC
CCAATATCACCGTGGACCCGGCCACTTTCGAAGTCTTTGTCGACGGTGAACTGGCGACCTGCGACCCGGCAGAAAAGCTG
CCTTTGACACAAAGGTACATGCTGCGATGA

Protein sequence :
MKMTRSEYAAMFGPTTGDMIRLGDTELWAEIEHDYTHYGDECLHGGGKTLRDGLGMAVGVTSAGGSLDMLICNVVVIDAM
AGIVKGDIGIKDGKIVAIGKAGNPATMDGVDPRLIVGAGTTVRDAEGMIATAGAIDVHVHFDSAQLVEHAISSGITTMLG
GSLGPITVGIDCGGVFNTGKMLQAAEHWPMNFGFLGRGNAHEPDAMVEQIENGCLGLKIHEDWGSMPAAIDACLTVADEL
DFQVQIHTDTLNESGFVEDTLAAIGDRTIHMYHTEGAGGGHAPDIITVAGLSNCLPSSTNPTNPFTINTFDEHLDMTMVC
HHLNPSIPEDVAFAESRIRAQTIAAEDVLHDFGAISMLGSDSQGMGRIHEVITRTWQLASKMRVQRGRLPEETVAKGDNH
RIKRYIAKYTINAARSFGIADHIGSIEPGKMADIVLWKPGYFGIKPELVIKGGFIAWGSMGDSAASLMTCEPLIMRPQWG
SFGKAAQACGACFVNPRAIDGGVSERLGLTKQLLPAQGTRTLRKSDMFLNDACPNITVDPATFEVFVDGELATCDPAEKL
PLTQRYMLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 4e-127 55
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 4e-127 55
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 4e-127 55
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 4e-127 55
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 2e-122 53
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 2e-122 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC2 YP_004691757.1 urease subunit alpha VFG0270 Protein 4e-127 55