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Name : appF (RLO149_c025310) Accession : YP_004691462.1 Strain : Roseobacter litoralis Och 149 Genome accession: NC_015730 Putative virulence/resistance : Unknown Product : oligopeptide transport ATP-binding protein AppF Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 2590850 - 2592694 bp Length : 1845 bp Strand : - Note : - DNA sequence : ATGCTAGATCACGAACCGCAAGGCCAGGACATTCATCCGATCGCGCAGATCAAAAGTCTCAGGGTCGAATTTCAGACCAA AGACGGCCCGGTCCTCGGGGTCGAAGATGTGTCATTTGACATCAATCCGGGTGAGACCGTCTGCGTGGTGGGGGAAAGCG GGTCGGGCAAATCCGTGTCCTCGCTGTCGCTGATGCGACTGGTAGAATTCGGTGGCGGTAAAATCACCGGGGGTCAGCTT CTTTTTGACCGGGCGGAAGCGGCGGATGTGGATCTTGCAGACACAGAAGCGGAGTTAATGCGCAGCATTCGCGGCAACGA AATCGGGATGATTTTTCAGGAGCCGATGACGGCACTTAATCCGGTCTTTACTATCGGGCGGCAATTGACCGAAGGACTGC GGCTGCACAAAAAGCTCAGCAAGTCTGAGGCGGAGGCCCGCGCGCTGGAATTGCTGCGCGAAGTTCGGATACCCGAACCC GAGCGGCGCCTGACACAATATCCGCACGAGTTGTCGGGGGGCATGCGGCAGCGGGTGGTGATCGCCATGGCGCTGGCCTG CAAGCCCCGGCTTTTGATCGCGGATGAACCGACAACAGCGCTGGACGTCACCATTCAGGCGGAAATTCTGGCGCTCATCG ATCGGCTCAAGCGTGAAACAGGCACGGCGGTGATGTTCATCACCCATGATATGGCGGTGGTGGCGCAGATGGCGGACCGC GTGGTTGTGATGTTTCGCGGCAACAAGGTCGAGGAAGGCCCGGTCGAAACCATCTTCGAAAACCCGCAACACCCCTACAC CAAGGCTTTGCTGGCGGCCGTGCCCAAATTGGGTGAAATGACGGGTAAGGAATTCCCCGAACCGATGAAGCTTCTGGGCC GCGAGGGCGCGCAGATCGCGCCGATCCCCGGCACCAATGAGGTCTTGCTGAGCGTCAAAAACCTGACGACGCGCTTTCCG GTCAAGGGCGGGTTTTTCCGCCGCACGGTGGCAAATGTCCATGCGGTTGAAGACTTATCGTTCAGCATAAACAAGGGTCA GACGCTGAGCCTTGTGGGCGAATCCGGCTGTGGCAAATCAACCGCAGGGCGGTCGATCCTGCGGCTTGTCGATCCGATGG CGGGTGAAATCATGCTGGGTGACAAGGACATCATGGCATTGGACCCAAAAGGTCTGCGCGAGGCGCGTCTTGACATGCAG ATGATCTTTCAGGACCCGTTTGCCTCGCTCAACCCGCAGATGCAGCTTGCCGATCAGGTGGCTGAGCCGATCCATAACTA CGCCACGCTCAAAGGGCAGGCCGTCGCGGACCGGGTCGCGATGCTGTTTGACCGGGTGGAATTGCCACGCAGTTTCATGC GCCGCTTTCCACATGAGCTGTCAGGCGGGCAACGGCAACGGGTGGCGATTGCGCGCGCGCTGGCCCTGAACCCCAAGCTG ATCATCGCGGACGAAGCGGTTTCCGCGCTGGATGTGTCGGTGCAGGCGCAGGTGCTGAACCTGATGATGGAACTGCAATC CGAGATGGGGATTTCGTTCCTGTTCATCAGTCACGACATGGCCGTGGTTGAGCGTGTCAGCCATCATGTCGGTGTCATGT ATCTGGGCCGCATTGTGGAACTTGGGCCGCGTGCCAGTGTCTTTGAAAACCCGCAACATGCCTATACGCAGGCGCTGATG AAAGCGGTCCCGATTGCGGATCCACGTCAGCGAAAAGACGAGAAAGATTTGAATTTCAAACCGATACCGTCGCCGATCCA TCCTGTCAGTTATGAGGCGCAGCCCTCGGTTTACCGCGAGGTGGCACCGGGTCACATGATCCTCGAAACCGATAGCGGCT ATTAG Protein sequence : MLDHEPQGQDIHPIAQIKSLRVEFQTKDGPVLGVEDVSFDINPGETVCVVGESGSGKSVSSLSLMRLVEFGGGKITGGQL LFDRAEAADVDLADTEAELMRSIRGNEIGMIFQEPMTALNPVFTIGRQLTEGLRLHKKLSKSEAEARALELLREVRIPEP ERRLTQYPHELSGGMRQRVVIAMALACKPRLLIADEPTTALDVTIQAEILALIDRLKRETGTAVMFITHDMAVVAQMADR VVVMFRGNKVEEGPVETIFENPQHPYTKALLAAVPKLGEMTGKEFPEPMKLLGREGAQIAPIPGTNEVLLSVKNLTTRFP VKGGFFRRTVANVHAVEDLSFSINKGQTLSLVGESGCGKSTAGRSILRLVDPMAGEIMLGDKDIMALDPKGLREARLDMQ MIFQDPFASLNPQMQLADQVAEPIHNYATLKGQAVADRVAMLFDRVELPRSFMRRFPHELSGGQRQRVAIARALALNPKL IIADEAVSALDVSVQAQVLNLMMELQSEMGISFLFISHDMAVVERVSHHVGVMYLGRIVELGPRASVFENPQHAYTQALM KAVPIADPRQRKDEKDLNFKPIPSPIHPVSYEAQPSVYREVAPGHMILETDSGY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-102 | 46 |
