|
Name : RLO149_c021800 (RLO149_c021800) Accession : YP_004691119.1 Strain : Roseobacter litoralis Och 149 Genome accession: NC_015730 Putative virulence/resistance : Virulence Product : TRAP C4-dicarboxylate transport system permease DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 2228239 - 2229528 bp Length : 1290 bp Strand : - Note : - DNA sequence : ATGCTGGTCTGGTTTCTGCCACTCTTTTTACTGTTCCTGCTCATCGGGTTGCCGGTCTTTTTTGGCCTGCTCGCAGCACC GGGTCTGTTGCTTTACCTGAATGGGCAGGAAAAGGACATCACACTGCTTTATCGCAATGTTTATAACGGGATGGACAGCT TTCCGCTCATGGCGATCCCCTTCTTCATGCTGGCCGGAGAGTTGATGAATCGGGGCGGGATCACCATGCGTCTGGTTGAA TTCAGTCAGGCCATGATGGGGCATTTTCGCGGCGGGTTGGCGCATGTGAATATCCTGTCCTCCATGCTGTTCGCCGGGCT TTCGGGGTCTGCAGTGGCCGATACATCCGCACTGGGATCGATGTTGATCCCCGCGATGGAAAAACAGGGCTATAGCCGCA AATTCGCCGCGGCGATTACAGCGGCAAGTTCCGTGATCGGGCCGATCATCCCACCATCGGGCATCATGATCATCTATGCC TATGTGATGGGCGAAAGCGTTGCCGCCCTGTTTCTTGCAGGCATCGTACCGGGGGTGATGGTGGGCCTTGGGCTGATGTT CATGGTCAAGATCATGGCGGACAAATATGATTTTCCCGTCGCCACCAAAAAACACACATGGGGCGAACGCGGGCAGGCCA GCCTCAAGGCGTTTTTCCCCTTGCTGACCCCGGTGATCATTCTGGGCGGTATTCTGGCAGGCGTCTTTACCCCGACCGAA GCGGCGGCGGTGGCCGTGGCCTACGCGCTTTTCATCGGCCTGTTCGTGATGCGCAGCCTCAAGCTGAGTGAGTTGCCGGA TGTGCTGGGCCGCGCGGGGCTCACATCGGCGGTTGTGCTGTTGCTAGTCGGTGCCGCGATGGCGTTCAAAACAGTTGTCA GCCTCAGTCACGCGCCCGAAGCCATGGCCGAATTTGTATTGGCGCTGACGTCCAACCCGCTGATCTTGCTGTTTTTGATC AACCTTTTGCTTTTTGCGGTTGGGATGTTCTTGGATGCGGGGCCTGCGATTATCATCCTTGGGCCAATTCTGGGGCCAAT TTTTGTCAGCCTCGGCGTGGACCCGATCCATTTTGCCATCATCATGAGTGTGAACCTGACCGTCGGACTGGCCACACCGC CGATGGGGCTGGTGTTGTTTGTCGCCTCCTCGGTTTCAGGCGAGCGGGTCGAGGCGATTTCAAAGGCGATCCTGCCGTTT CTGGCGGTCGAAATCGTGGTGATTTTCCTGATCACCTACATACCGGCAATTTCCATGACCATCCCGCGACTGACGGGCTT TGCCAACTGA Protein sequence : MLVWFLPLFLLFLLIGLPVFFGLLAAPGLLLYLNGQEKDITLLYRNVYNGMDSFPLMAIPFFMLAGELMNRGGITMRLVE FSQAMMGHFRGGLAHVNILSSMLFAGLSGSAVADTSALGSMLIPAMEKQGYSRKFAAAITAASSVIGPIIPPSGIMIIYA YVMGESVAALFLAGIVPGVMVGLGLMFMVKIMADKYDFPVATKKHTWGERGQASLKAFFPLLTPVIILGGILAGVFTPTE AAAVAVAYALFIGLFVMRSLKLSELPDVLGRAGLTSAVVLLLVGAAMAFKTVVSLSHAPEAMAEFVLALTSNPLILLFLI NLLLFAVGMFLDAGPAIIILGPILGPIFVSLGVDPIHFAIIMSVNLTVGLATPPMGLVLFVASSVSGERVEAISKAILPF LAVEIVVIFLITYIPAISMTIPRLTGFAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-47 | 41 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-47 | 41 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 2e-47 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RLO149_c021800 | YP_004691119.1 | TRAP C4-dicarboxylate transport system permease DctM | VFG1110 | Protein | 1e-47 | 41 |
