Gene Information

Name : RLO149_c021460 (RLO149_c021460)
Accession : YP_004691085.1
Strain : Roseobacter litoralis Och 149
Genome accession: NC_015730
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 2185484 - 2186230 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence :
ATGTCACAAAACGAAATTCGCTGCGAAGGGCTTGCAAAGCGCTTTGATGATGGGGCCGCCCTTGGGCCGCTGTCCGTGAC
TTTTGCACCCGGACAGACAACGGCTTTGGTCGGACCGTCGGGGTGTGGTAAGTCCACGTTGCTGCGGTTGATTGCCGGGC
TTGAAGATCCCACAGAAGGCACCGTGCGCATCGGCCACAAGCCTCCAAAGGAGGTCGCCAGATCCGGCGCGCTGTCGATG
GCGTTTCAGGACCATGCCCTGCTGCCGTGGCGGACGGTGCGTGCGAATGTGACGCTCGGGGCGCGGCTTGCGCGCAAACC
GGATCACCGCGCCGATGCCCTGATCGCGCTGGTTGGACTGGCCGGGTTTGAAGGGCATCGCCCGGCGGAGCTTTCGGGTG
GGATGCGACAACGCGCAGCCATCGCCCGCAGCCTGATCTCCGAGCCTGATGTGCTCTTGCTGGATGAACCCTTTGGCGCG
GTGGATGCCCTGACGCGCAGCAAGCTGAACGCGGACCTGCCCCCGCTCTGGCGCGACCGGGACACCACAACCATCATGGT
CACCCACTCCGTAGACGAAGCGGTGCTCCTGTCGGACCGGATCATCGTTCTGTCAGAACGTCCGGGCCAGATCATCGCGG
ATATTCCGGTCATGCTTGAGGGACGGCGCAGCATGTCCATCACGCGCCTGCCTGTCTTTCAGGCCAAAACCAAAGAGGTC
CTCGACGCCCTTGGGGTCACCGTCTGA

Protein sequence :
MSQNEIRCEGLAKRFDDGAALGPLSVTFAPGQTTALVGPSGCGKSTLLRLIAGLEDPTEGTVRIGHKPPKEVARSGALSM
AFQDHALLPWRTVRANVTLGARLARKPDHRADALIALVGLAGFEGHRPAELSGGMRQRAAIARSLISEPDVLLLDEPFGA
VDALTRSKLNADLPPLWRDRDTTTIMVTHSVDEAVLLSDRIIVLSERPGQIIADIPVMLEGRRSMSITRLPVFQAKTKEV
LDALGVTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-37 44
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-29 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-28 41