Gene Information

Name : RLO149_c018840 (RLO149_c018840)
Accession : YP_004690835.1
Strain : Roseobacter litoralis Och 149
Genome accession: NC_015730
Putative virulence/resistance : Unknown
Product : resolvase/recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 1940960 - 1941565 bp
Length : 606 bp
Strand : +
Note : -

DNA sequence :
ATGCCAGTTACTCCCCCAATCCTGACATCGCGACGTATCGGGTATGCGCGGGTTTCCACAGAAGATCAGAAACTTGATCT
ACAAAAAGACGCGCTGGAAAAAGCCAGCTGCGATTTGATCTTCGAAGATCATGGGGTTTCTGGCGCGAAATCCACACGTC
CGGGATTGGATGCCATGCTGGAGCAGTTGCGCGCCGGTGATACGGTCGTTGTGTTTAAACTGGATCGCCTTGGACGCTCC
GTCGTCCATCTTGCGGATCTTCTGGTGCTGTTTCAGGGGCAGGGCATTCATTTCCACTCTCTGTCTGAGGCGATCAATAC
GGCCTCACCCAGCGGGAAACTGATTTTTCACATCATCAGCGCTGTCGCCGAGTTTCAACGCGACCTGATTATCGAGAACA
CCTGCGCTGGCCTGAGGGCCGCCAAACGGCGCGGACAACATCTGGGAAGACCGTTTTTGCTTGATGCAGAGGCTATATAC
ACAGCCCATACAAAAGCGGCTGCAAAAGGTATGAGCATGGGCGGGCTGGCCTCTGAGCTTGGCGTATCGGTATCAACTCT
GCGCCGTGCCTTCGCCAGGTTCGGCCTTGCCGGTCTGAGGGCCTGA

Protein sequence :
MPVTPPILTSRRIGYARVSTEDQKLDLQKDALEKASCDLIFEDHGVSGAKSTRPGLDAMLEQLRAGDTVVVFKLDRLGRS
VVHLADLLVLFQGQGIHFHSLSEAINTASPSGKLIFHIISAVAEFQRDLIIENTCAGLRAAKRRGQHLGRPFLLDAEAIY
TAHTKAAAKGMSMGGLASELGVSVSTLRRAFARFGLAGLRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 5e-29 51
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 5e-29 51
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 5e-29 51
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 2e-24 45
res AGK06966.1 resolvase Not tested SGI1 Protein 5e-31 44
res AGK07012.1 resolvase Not tested SGI1 Protein 5e-31 44
res AGK07070.1 resolvase Not tested SGI1 Protein 5e-31 44
res AAK02044.1 resolvase Not tested SGI1 Protein 5e-31 44
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 5e-31 44
res AGF34985.1 resolvase Not tested SGI1 Protein 5e-31 44
res AGF35025.1 resolvase Not tested SGI1 Protein 5e-31 44
res AGF35059.1 resolvase Not tested SGI1 Protein 5e-31 44
res AGK06929.1 resolvase Not tested SGI1 Protein 5e-31 44
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 7e-25 44
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 1e-24 44
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 1e-24 44