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Name : gabD1 (RLO149_c001380) Accession : YP_004689133.1 Strain : Roseobacter litoralis Och 149 Genome accession: NC_015730 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase (NADP+) GapD Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 134434 - 135912 bp Length : 1479 bp Strand : - Note : - DNA sequence : ATGAAAGACATGCCTGCAACCAACCTCAAATCACTGCTGAAGGACCCCAGCCTGCTGGAAACGCGCGCCTATGTGGATGG CGCATGGATTGATGGGGATAACGGCACCTTTGACGTCACGAACCCCGCACGCGGCGACGTCATCGCGCAGGTCGCGGATC TGAGCCGCGCGCAAGTGGCCAAAGCCATCGCGCGCGCTGAGGTGGCGCAGAAGGACTGGGCGGCCCAAACCGGGAAAGAG CGCGCAGGCGTCATGCGCCAGTGGTTTGATCTGATGATGGCGCATGCGGACGATCTTGCGACCATCCTGACCGCGGAACA GGGCAAGCCTCACGCCGAGGCCAAGGGCGAGATCGCCTATGGGGCGAGCTTTATCGAGTTTATGGGGGAACAGGCAAAAC GCGTTTACGGAGAGACCATTCCGGGGCACCAGCGCGACAAACGTATCATCGTGCTCAAGCAACCCATCGGCGTTGCCGCC TCGATTACCCCGTGGAATTTCCCCAACGCGATGATCACCCGCAAGGCGGCCCCTGCCCTTGCGGTCGGGTGTGCCTTTGT GGCCCGCCCGGCGGCTGAGACGCCGTTGTCCGCCATCGCAATGGGTGTTCTGGCAGAGCGTGCAGGCATCCCTGCAGGTG TCTTCAACGTTGTACCATCGTCGTCGTCTTCGGAGATCGGCAAGGAGTTCTGCGAAAACCCCGGCGTGCGCAAGCTGACG TTCACTGGCTCAACCGAAGTCGGTCGCATTCTTTTGAAACAGGCCGCCAATCAGGTCATGAAGTGCTCTATGGAACTGGG TGGGAATGCCCCGTTCATCGTGTTTGACGACGCGGATCTTGATGCCGCCGTTGAGGGCGCGATGATGTGCAAGTTCCGCA ACAACGGTCAGACCTGTGTCTGTGCGAACCGAATTTACGTTCAGGCCGGGGTCTATGACGCCTTTGCCGAAAAGCTGAAA ACCGCCGTCGAAGGGTTGCGCGTCGGCGATGGTCTTGAGGACGGCGTGACAACCGGCCCGCTGATCAACACAGAAGCCGT CGAAAAAGTGCAGGACCATATGAACGACGTGGTTTCAAACGGTGGTGCTGTGCTGACGGGCGGCAAACCGCACGATCTGG GTGGCTCGTTCTTTGAGCCGACGATTGTGACCGGTGTGACCCAAGACATGAAAGTCGCGCAGGAAGAGACATTCGGCCCC CTCGCCCCTCTGTTCAAATTCGAGGATGAGGATGATGTGATCGCAATGGCCAATGATACGATCTTTGGTCTTGCGTCGTA TTTTTATGCCAAGGACCTCAGCCGCGTTTACAAAGTGTCAGAGGCGCTGGAATACGGCATCGTGGGCGTGAACACGGGTA TCATCTCAACCGAACTCGGCCCCTTCGGCGGTGTGAAACAATCCGGGCTGGGCCGGGAGGGATCACACCACGGCATCGAA GACTTCCTTGAGATGAAATACATCTGCATGAGTGTGTGA Protein sequence : MKDMPATNLKSLLKDPSLLETRAYVDGAWIDGDNGTFDVTNPARGDVIAQVADLSRAQVAKAIARAEVAQKDWAAQTGKE RAGVMRQWFDLMMAHADDLATILTAEQGKPHAEAKGEIAYGASFIEFMGEQAKRVYGETIPGHQRDKRIIVLKQPIGVAA SITPWNFPNAMITRKAAPALAVGCAFVARPAAETPLSAIAMGVLAERAGIPAGVFNVVPSSSSSEIGKEFCENPGVRKLT FTGSTEVGRILLKQAANQVMKCSMELGGNAPFIVFDDADLDAAVEGAMMCKFRNNGQTCVCANRIYVQAGVYDAFAEKLK TAVEGLRVGDGLEDGVTTGPLINTEAVEKVQDHMNDVVSNGGAVLTGGKPHDLGGSFFEPTIVTGVTQDMKVAQEETFGP LAPLFKFEDEDDVIAMANDTIFGLASYFYAKDLSRVYKVSEALEYGIVGVNTGIISTELGPFGGVKQSGLGREGSHHGIE DFLEMKYICMSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 7e-148 | 60 |
