Gene Information

Name : RLO149_c010890 (RLO149_c010890)
Accession : YP_004690059.1
Strain : Roseobacter litoralis Och 149
Genome accession: NC_015730
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1127679 - 1127942 bp
Length : 264 bp
Strand : +
Note : -

DNA sequence :
ATGAAGGCACGATTTACGGACGAACAGATCATATCGATGATCAAGGAACAGGAATCTGGTGAGAAGACTGCTGACGTGTG
TCGGCGGCACGGGATCAGCTCGGCGACGTTCTACAAATACAAATCGAAGTATGGAGGCATGGAGCCGTCAGATGCGAAGC
GATTGCGGGCATTGGAAGATGAGAACGGCAAGCTGAAGAAGCTGTTGGCAGAGCAGATGCTCGACAATGCGATGCTGCGA
GACATCAATTCAAAAAAATGGTGA

Protein sequence :
MKARFTDEQIISMIKEQESGEKTADVCRRHGISSATFYKYKSKYGGMEPSDAKRLRALEDENGKLKKLLAEQMLDNAMLR
DINSKKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 4e-18 52
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 4e-18 52
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 3e-17 52
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 4e-17 52
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 8e-18 50
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 8e-18 50
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 4e-16 48