Gene Information

Name : dhaS4 (CNE_BB1p09840)
Accession : YP_004688433.1
Strain :
Genome accession: NC_015727
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase DhaS
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 1035496 - 1036962 bp
Length : 1467 bp
Strand : -
Note : -

DNA sequence :
ATGAAGCAGTATCCAATGTTCATCGACGGGGCCTTCGGCAATGCAGCCGACGGTCGTTGGTTTGAAACCCAAAATCCCTA
CACGGGCAAGCCTTGGGCCGAAGTGGCTCGGGGCGGTGAAGCCGACGTCGACCGTGCAGTGAAGGCTGCTGATCGGGCCT
TCCGTTCGGGACCCTGGGCCGACATGACAGCGACCCAGCGTGGCGCCTTGCTGCGAAAACTTGGCGACCTCATTGCCGCG
AACGCCGACCGGCTCGCCGCGTTCGAAGTGCAGGACAACGGCAAGCTCTTGGCGGAAATGAGCGCACAGCTTAAGTATCT
GCCGCAGTGGTTCTATTACTTCGGAGGCTTGGCAGACAAGGTTGAAGGGTCGGTCATTCCGCTGGACAAGAAGGGATACT
TCAACTACACGCGACGCGAGCCCTTGGGTGTAGTCGCTGCCATCACCCCGTGGAACTCGCCGCTCATGCTGCTGGCATGG
AAGATTGCTCCGGCCCTGGCTGCAGGCTGCACGGTGGTCGTGAAACCTTCGGAGTTCACCTCGGTCTCGGCGCTGGAACT
GGCGGTCCTGTTCCAAGACGCAGGCTTCCCGCCGGGCGTCTTCAACGTCGTGACGGGCTTCGGCGGAGAGGTTGGTTCTC
CTCTAGTGACGCATCCGCTGGCAAAGAAGGTCACGTTTACGGGCTCCGATGCAACTGGCCGAGTTATCAACCAGCAGTGC
GCTGCGCAGTTCAAACACGTCAGCTTGGAACTCGGCGGAAAGTCGCCGAATATCGTGTTCAATGACGCGAACCTGGATGA
CGCGGTCAACGGAGCCGTATCCGGCATCTTTGCGGCCAGCGGCCAGACCTGTATTGCAGGCTCCCGCCTTCTGTTGCAGG
AAGACATTCACGACGCTTTCGTGGAAAAGCTGCTTGCTCTGGCTCGCACGGCGAAGCTTGGCAATCCGATGGAGGCTTCT
ACGCAGGTTGGACCCATTACCACACCTGCTCAGTACGAGAAGGTACTGTCGTACATTGAGATTGCGCAAGGCGAAGGAGC
GAAGCTGCTGCTCGGCGGTAAGCCAGCTAGTTGCGGCGAATGGTTTGTCGAGCCGACCATCTTTTCGGACGTTACGCCGA
AGATGCGCATCGCCCAGGAAGAAGTATTCGGCCCGGTCTTATCAATCTTGAAGTTCAAGGACGAGGACGAAGCCATCGCA
ATGGCCAACGACAGCTGCTATGGACTTGGTGCGGGCGTCTGGACCGGAGACATTGGGCGCGCGTTCCGGATGTCCGAGCG
CATTCAAGCGGGTACGGTCTGGGTCAACACGTATCGAGCTGTCAGCTTCATGTCGCCGTTCGGTGGCTACAAGGACTCCG
GTCTTGGTCGCGAAAATGGTATGGCTGCTATCGAGTCGTACCTGCAGACGAAAAGCGTTTGGGTCAATACGGGCGCGCCG
ACAGGCAATCCGTTCACTATTCGGTAA

Protein sequence :
MKQYPMFIDGAFGNAADGRWFETQNPYTGKPWAEVARGGEADVDRAVKAADRAFRSGPWADMTATQRGALLRKLGDLIAA
NADRLAAFEVQDNGKLLAEMSAQLKYLPQWFYYFGGLADKVEGSVIPLDKKGYFNYTRREPLGVVAAITPWNSPLMLLAW
KIAPALAAGCTVVVKPSEFTSVSALELAVLFQDAGFPPGVFNVVTGFGGEVGSPLVTHPLAKKVTFTGSDATGRVINQQC
AAQFKHVSLELGGKSPNIVFNDANLDDAVNGAVSGIFAASGQTCIAGSRLLLQEDIHDAFVEKLLALARTAKLGNPMEAS
TQVGPITTPAQYEKVLSYIEIAQGEGAKLLLGGKPASCGEWFVEPTIFSDVTPKMRIAQEEVFGPVLSILKFKDEDEAIA
MANDSCYGLGAGVWTGDIGRAFRMSERIQAGTVWVNTYRAVSFMSPFGGYKDSGLGRENGMAAIESYLQTKSVWVNTGAP
TGNPFTIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-75 43
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 1e-70 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-76 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-76 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-76 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-76 42
hpaE AAO17179.1 HpaE Not tested tcd island Protein 4e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dhaS4 YP_004688433.1 aldehyde dehydrogenase DhaS VFG0082 Protein 1e-75 43