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Name : gspE (CNE_1c34910) Accession : YP_004687266.1 Strain : Genome accession: NC_015726 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3630354 - 3631832 bp Length : 1479 bp Strand : + Note : - DNA sequence : ATGGCCGCGCGGCTGGTCTCGTACGGCTTTGCGCGCGAGGCGCCGCTGCTGGTCGCGCACCAGCGCCCTGACGGACTGGA AGTCTGGGTGACCCGCGCCACGTCCCCGACCGCGCTGGCCGAGGTCGCGCGCGTGCACGGCGCGCTGCGCCTGCGCGTGC TTGAGCCCGAGGCACTGGAACTCGCCATGGCCGATGCCTACAACCGCCAGGACGCCGGCAGCGCCGCGCAGGTGGTCGGC GAGGTCGAAGGCGAGGTCGACCTGTCGCGCCTGATGCAGGACATCCCGGCGGTGGAGGACCTGCTTGAATCCGAGGACGA CGCGCCGATCATCCGCATGATCAATGCGCTGCTGACGCAGGCCGCGCGCGAAGGCGCCTCGGATATCCATATCGAGCCGT TCGAGTCGTCGTCGGTGGTGCGCTTCCGTGTGGACGGTACGCTGCGCGACGTGGTGCGGCCCAAGAAGGCGCTGCACGGC GCGCTGATCTCGCGTATCAAGATCATGGCGCAGCTCGACATCGCCGAGAAACGCCTGCCGCAGGACGGCCGCATCACGCT GCGCGTGGGCGGGCGCCCGGTCGACGTGCGGGTCTCGACCCTGCCCACCGGCCATGGCGAGCGCGCGGTGCTGCGCCTGC TGGACAAGGAAGCGGGCCGGCTCGACCTGGCCAAGCTGGGCATGGCGCCCGGCACGCTGCGCGGCTTCGACCACCTGATC CGCCAGCCGCACGGCATCGTGCTGGTGACCGGGCCGACCGGCTCGGGCAAGACCACCACGCTGTATGCGGCGCTGTCGCG GCTGGATGCGCGCACCACCAACATCATGACGGTGGAAGACCCGATCGAGTACGACCTGGACGGCATCGGCCAGACCCAGG TCAACGCGCGCATCGACATGACCTTCGGCAAGGCCCTGCGCGCGATCCTGCGCCAGGACCCGGACGTGGTCATGATCGGC GAAATCCGCGACCTGGAAACCGCGCAGATCGCGGTGCAGGCCTCGCTGACCGGCCACCTGGTGCTGGCCACGCTGCACAC CAACGACTCGGCCTCGGCGGTGACGCGGCTGGTCGACATGGGGATCGAGCCGTTCCTGCTGTCGTCATCGCTGCTGGGGG TGCTGGCACAGCGGCTGGTACGCCGCCTGTGCCAGCACTGCAAGAGCGAGGAAGTGATCGAGGTCACTGCCGCCGAGGCC GAGGTGCTGCACGCGCAGGGCAAGCCGCTGCAGACCGTGTGGCACCCGGTGGGCTGCGACAAGTGCGGCCAGTCCGGGTA CCAGGGGCGCATGGGCGTGTATGAGCTGCTGACCGTCGGTGACGAGATCCGCACCATGATCCACCGGCAGGCGCCGGAGT CCGAGATCAAGCAGGTGGCACTGGCGCACGGCATGCACACCATGCGCGGCGACGCGCAGCGCTGGGTCGACAGCGGCGCG ACCTCGCTTGAGGAAGTGCTGCGCGTGACGCGCGACTAA Protein sequence : MAARLVSYGFAREAPLLVAHQRPDGLEVWVTRATSPTALAEVARVHGALRLRVLEPEALELAMADAYNRQDAGSAAQVVG EVEGEVDLSRLMQDIPAVEDLLESEDDAPIIRMINALLTQAAREGASDIHIEPFESSSVVRFRVDGTLRDVVRPKKALHG ALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPTGHGERAVLRLLDKEAGRLDLAKLGMAPGTLRGFDHLI RQPHGIVLVTGPTGSGKTTTLYAALSRLDARTTNIMTVEDPIEYDLDGIGQTQVNARIDMTFGKALRAILRQDPDVVMIG EIRDLETAQIAVQASLTGHLVLATLHTNDSASAVTRLVDMGIEPFLLSSSLLGVLAQRLVRRLCQHCKSEEVIEVTAAEA EVLHAQGKPLQTVWHPVGCDKCGQSGYQGRMGVYELLTVGDEIRTMIHRQAPESEIKQVALAHGMHTMRGDAQRWVDSGA TSLEEVLRVTRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-114 | 52 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-114 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_004687266.1 | general secretion pathway protein E | VFG0182 | Protein | 2e-125 | 57 |
| gspE | YP_004687266.1 | general secretion pathway protein E | VFG1876 | Protein | 4e-121 | 52 |
| gspE | YP_004687266.1 | general secretion pathway protein E | VFG2048 | Protein | 2e-113 | 51 |
| gspE | YP_004687266.1 | general secretion pathway protein E | VFG2426 | Protein | 1e-78 | 47 |
| gspE | YP_004687266.1 | general secretion pathway protein E | VFG0112 | Protein | 3e-83 | 45 |
