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Name : radC1 (CNE_1c27730) Accession : YP_004686568.1 Strain : Genome accession: NC_015726 Putative virulence/resistance : Virulence Product : DNA repair protein RadC Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2003 EC number : - Position : 2877015 - 2877506 bp Length : 492 bp Strand : - Note : - DNA sequence : ATGTCTTTCGTGTCTGATTCCACCCCGCAGTCGCTCGCTCTGCTTGCCGCGCAGCACGAGGATTGGATCATCCAGCAGGC CATCACCGTGCTGGAGAAGCGTGTCTTCAAGTCTGGTCCGGTGCTGAACGGTCTCGCGGCCGTGTGCGACTTCCTGCGCC TCAAACTGGTTGCGGAGCCCAACGAGGTGTTTGCAGCGGTGTTCCTCGACGCTCAGGACCGGGTACTCGCCTACGAGCCG CTGTTCAAGGGCTCGCGTAGCGAGGTCGCGGTGTATCCACGAGTCGTTGTTCAGCGCGCCTTGGCCCTCAACGCATCGGC GCTCATCCTTGCGCATCAACATCCGTCCGGGATAACCAAGCCGTCGATGGCCGATCGAGTGCTCACGGACCAACTCAGCG TCGCCTTGGCGCTGGTGGATGTTCGTCTGCTGGAGCACGTCATCATCGGCAAGGGCACACCGTACTCGTTCGCCGAATCG GGGCTGCTGTAA Protein sequence : MSFVSDSTPQSLALLAAQHEDWIIQQAITVLEKRVFKSGPVLNGLAAVCDFLRLKLVAEPNEVFAAVFLDAQDRVLAYEP LFKGSRSEVAVYPRVVVQRALALNASALILAHQHPSGITKPSMADRVLTDQLSVALALVDVRLLEHVIIGKGTPYSFAES GLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| radC | AAN62140.1 | putative DNA repair protein RadC | Not tested | PAGI-2(C) | Protein | 5e-47 | 68 |
| radC | AAN62275.1 | putative DNA repair protein RadC | Not tested | PAGI-3(SG) | Protein | 6e-33 | 57 |
| VC1786 | NP_231421.1 | DNA repair protein RadC | Not tested | VPI-2 | Protein | 1e-21 | 44 |
| VC0395_A1383 | YP_001217326.1 | DNA repair protein RadC | Not tested | VPI-2 | Protein | 1e-21 | 44 |
| VC0510 | NP_230161.1 | DNA repair protein RadC-like protein | Not tested | VSP-2 | Protein | 4e-19 | 44 |
| VPI2_0034 | ACA01849.1 | DNA repair protein RadC | Not tested | VPI-2 | Protein | 6e-22 | 42 |
| ECO103_3589 | YP_003223446.1 | radC-like protein YeeS | Not tested | LEE | Protein | 2e-18 | 42 |
| unnamed | AAK00479.1 | unknown | Not tested | SHI-1 | Protein | 2e-18 | 41 |
| unnamed | CAD66203.1 | hypothetical protein | Not tested | PAI III 536 | Protein | 3e-19 | 41 |
| yeeS | AAZ04458.1 | putative RadC-like protein | Not tested | PAI I APEC-O1 | Protein | 1e-19 | 41 |
| yeeS | YP_854323.1 | radC-like protein YeeS | Not tested | PAI I APEC-O1 | Protein | 2e-19 | 41 |
| c5152 | NP_757000.1 | radC-like protein yeeS | Not tested | PAI II CFT073 | Protein | 2e-19 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| radC1 | YP_004686568.1 | DNA repair protein RadC | VFG1119 | Protein | 3e-22 | 44 |
| radC1 | YP_004686568.1 | DNA repair protein RadC | VFG1678 | Protein | 1e-19 | 41 |
