Gene Information

Name : CNE_1c27670 (CNE_1c27670)
Accession : YP_004686562.1
Strain :
Genome accession: NC_015726
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3481
EC number : -
Position : 2869564 - 2871408 bp
Length : 1845 bp
Strand : -
Note : -

DNA sequence :
ATGCTTTCGTTGTTCCTACGCAGGAGAGTGCCGCCCAACACCGACACCCGGTCTACGGCCACCATGGAGCCTCCTAATGG
GCTGACGCGGCCAGAATCGGCCGCGTCACTGCTGGCGACACCGCGCCGACAGAAGCTGCTGGAGCACATTTGGCAGCGCA
CTTCCGTCTCCCGCAACCAGTTCGCCACGTTGTACGGCGCGCCGTTGGAACGCTACGCCGAGCTGGTCCAACTGTTTCCG
GCCTCGGAAAGCCACCACCATGCCTACCCCGGCGGCATGTTGGATCACGGACTGGAAACCGTCGCCTACGCGCTGAAGTT
GCGACAAGCCCATCTCCTTCCGGCTGGCTCGACGCCGGAAGCTCAAGCTGCCCAAGCGGAAGCCTGGACCGCGGGCACGG
CCTACGCGGCACTGCTGCACGATGTCGGCAAGGTCGCTGTGGATCTGCAGGTCGAGTATGGCGACGGCACTGTCTGGCAT
CCCTGGCATGGGCCACTTCGACTGCCGTACCGCTTCCGTTACCCCAAGAATCGCGAGTACCGGCTTCACGGCGCAGCAAC
GGGGCTGCTGTACGCGCGCCTGCTCGATACGGACATTCTCGACTGGCTGAGTGGGTATCCTGACTTGTGGACCGCCTTGC
TTTATGTCCTGGCAGGCCAGAACGAGCACGCCGGCATGCTAGGCGAGCTGGTGGTTCAGGCCGATCAGGCCTCGGTCGCT
CAGGAGCTCGGCGGTGATCCGAGTAAGGCGCTGGCTGTGTCCCGCAACGCGTTGCAGCGCAAGCTGCTGGAGGGCCTGCG
TTATCTGCTCAAAGAGGAGTTCAAGTTGAACCAGCCTCAGGCTTCCGATGGCTGGTTGACTCAGGATGCGCTCTGGTTAG
TGAGCAAGACCGTTTCCGATAAGCTGCGGGCACACCTGTTGTCGCAGGGCATCGACGGGATTCCGGCGAGCAATACGGCC
GTGTTCAACGTGCTGCAGGATCACGGCATCGCCTTACCCACTCTGGACGGCAAGGCGATCTGGAAAGGTACCGTGACAAG
CGATGTCGGTTGGTCCCATACCTTCACGCTTCTGCGCCTCACACCCTCGCTGATCTGGGAAGGAGATCAGCGGCCCCCAT
CGTTCACCGGTACGGTGACGGTAGTCCAGGAAGCGGGGGAGGCAACGAATCTCGGATCGGTGCCGAGCAGTGCGCCTTCG
CCCGCAACTCGGTCTTCGTCAGCTAGCCAGCCAACGGGCGATAGCGGCGAAGCGTTGGATCTGCTAGTCGCTCCCGGCGC
AGCGTCGGCGGCTACCTTATCACTCACGGAAATCGACCCATCAGTTATAGAAGACCGGACCGTCGAGTCCGCAGAGTCGA
GGGCGCCTATCGACTCGGTTTCCCTGGCACCCGCCTTAACTTCGGGACAGGAGCAAACGCCGTCAGGCGAGCATTTTGTT
GCTTGGCTGCGCCGGCACATCGAAGCACGCACGCTCATCATCAATGACGCCAAGGCATTGGTGCATACGGTCGCCGATAC
CGTCTATCTAGTCAGCCCCGGTGTGTTCCAGCGCTATGCCCAAGAACATCCCAAAACCGCTTTCCTTGCCAAGCAAGCTC
GAGTGCCCGATTGGCAATGGGTGCAGAAACGGTTCGAGAAACTGCACTTGCACCGCAAACAGCAGGACGGCGCGAATATC
TGGACCTGCACCGTGGTGGGGCCGCGGAAGTCGCGGAGACTTCATGGCTACCTGTTGGAAGACCCACGAGTCCTGTTCTC
CGATATGCCGCCGAACAACCCTTACCTGTCGCTATCCCCGTCCGCCAGTTCTGGGCAGGAGTCACCGCGTGTAGTCCCGG
CCTAA

Protein sequence :
MLSLFLRRRVPPNTDTRSTATMEPPNGLTRPESAASLLATPRRQKLLEHIWQRTSVSRNQFATLYGAPLERYAELVQLFP
ASESHHHAYPGGMLDHGLETVAYALKLRQAHLLPAGSTPEAQAAQAEAWTAGTAYAALLHDVGKVAVDLQVEYGDGTVWH
PWHGPLRLPYRFRYPKNREYRLHGAATGLLYARLLDTDILDWLSGYPDLWTALLYVLAGQNEHAGMLGELVVQADQASVA
QELGGDPSKALAVSRNALQRKLLEGLRYLLKEEFKLNQPQASDGWLTQDALWLVSKTVSDKLRAHLLSQGIDGIPASNTA
VFNVLQDHGIALPTLDGKAIWKGTVTSDVGWSHTFTLLRLTPSLIWEGDQRPPSFTGTVTVVQEAGEATNLGSVPSSAPS
PATRSSSASQPTGDSGEALDLLVAPGAASAATLSLTEIDPSVIEDRTVESAESRAPIDSVSLAPALTSGQEQTPSGEHFV
AWLRRHIEARTLIINDAKALVHTVADTVYLVSPGVFQRYAQEHPKTAFLAKQARVPDWQWVQKRFEKLHLHRKQQDGANI
WTCTVVGPRKSRRLHGYLLEDPRVLFSDMPPNNPYLSLSPSASSGQESPRVVPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG44 AAN62266.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 0.0 66
ORF C36 AAN62129.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 3e-178 64
unnamed ABR13343.1 hypothetical protein Not tested PAGI-5 Protein 3e-133 48
EXA2 ABD94612.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-133 48
RL003 AAP84130.1 pathogenesis-related protein Not tested PAPI-1 Protein 2e-133 47