Gene Information

Name : dppD1 (CNE_1c23200)
Accession : YP_004686128.1
Strain :
Genome accession: NC_015726
Putative virulence/resistance : Unknown
Product : dipeptide transport system ATP-binding protein DppD
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : 3.6.3.-
Position : 2404331 - 2405992 bp
Length : 1662 bp
Strand : -
Note : -

DNA sequence :
ATGACCGCGGTGTCTCCCGTGATCCAGCCGGCCGTGGCGCCGGCCGCGGCGCCGGCGCCCGGTTCCACGCTGATGTGCGT
CGACAAGCTTTCCGTCACCTTCGGCCACGGCGAGCATGCCACCCGTGCCGTGCGCGAAGTCAGCTTCGATCTGCGCGCGG
GCGAGCGCTACGCGCTGGTGGGCGAGTCGGGCTCGGGCAAGACCGTGACCGCGCTGGCGATGCTGCGGCTGGTGGAGGAC
GCCTACTACGACGGCGCCATCCGCTTCGAGGGCAAGGACCTGCTGGCGGTGTCGGACCGCGAGATGCGCGGCATCCGCGG
CGCCGAGATCGCGATGATCTTCCAGGAGCCGATGACGGCGCTCAACCCGCTGTACACCATCGGCAACCAGATCGTCGAGA
CTCTGGCGCTGCACGAGGGCCTGGACCGCCGCGCCGCGCGCGAGCGCGCCATCGCGCTGCTGGAGCGTACCGGCATCAGC
GACGCCGCGCACCGCTTCGACAGCTTTCCGCACCAGCTCTCGGGCGGCCAGCGCCAGCGCGCCATGATCGCCATGGCGCT
GGCCTGTCGCCCCAAGCTGCTGCTGGCCGACGAGCCGACCACGGCGCTGGACGTGACCATCCGCGCCCAGATCATGGACC
TGCTACGCGACCTGCAGGCCGAGTTCGGCATGGCGGTGATGCTGATCACCCATGACCTCAACCTGGTGCGTTCCTTTGCC
CAGCGCGTGGGCGTGATGGAGAAGGGCGTGCTGGTCGAGACCGGCGAGACCGCGCAGGTGTTTGCCGCCCCCCAGCACCC
CTACACCCGCAAGCTGATCGACAGCCGCCCCAGGCGCGAGGTGCTGCCGCTGGTGCCGCTGGCGCCGGTGCTGCTGGAAG
CGCGCAAGCTGAGCGTCAACTACGCGCGCAAGCGCCGCGGGCTGGCCGGCTGGTTCGGCAAGGACCAGTTCGCGGCGGTC
AAGGACGTGGACTTCCAGCTGCGCGAGGGCGAGACCGTCGGCATCGTCGGCGAGTCCGGTTCGGGCAAGACCACGCTGGC
GCATACCGTGCTCGCGCTGCAGCGCAAGAGCGGCGGCACCATCCATTTCCTGGGCCGCAGCTTCGACACCGCCACGCGCG
ACGATCGCCGCCAGTTGCGCGCGCGCATGCAGGTGGTGTTTCAGGACCCGTTCGGCTCGCTGGCGCCACGCATGACCATC
GAGCAGATCGTCGGCGAAGGCCTAGCGCTGCACCAGCCCGGCCTGTCGCGCGAGGGCACGCGCCAGCGCGTGATCGAAGC
CCTGCGCGAGGTCGGCCTGGACCGTACCGCGCTGGGCCGCTATCCACATGAATTCTCGGGCGGGCAGCGGCAGCGCATCG
CCATTGCCCGGGTGCTGATCCTCAAGCCGCAGATCCTGGTGCTGGACGAGCCCACCTCGGCCCTGGACGTGTCGATCCAG
CAGCAGGTGCTGGCGCTGCTGTCCCAGCTGCAGCACAAGTACAACCTCACCTACCTGTTCATCAGCCATGACCTGGCGGT
GATCCGTGCCATGGCGCATCGGGTTTTCGTGATGAAGGCGGGGGAGGTGGTCGAGGCCGGCGACACCGAAGCGGTGCTGG
GCGCACCCCAGCACCCCTATACGCGCAAGCTGATGGCGGCGGCGCAGGTCGGCGCGGCCTGA

Protein sequence :
MTAVSPVIQPAVAPAAAPAPGSTLMCVDKLSVTFGHGEHATRAVREVSFDLRAGERYALVGESGSGKTVTALAMLRLVED
AYYDGAIRFEGKDLLAVSDREMRGIRGAEIAMIFQEPMTALNPLYTIGNQIVETLALHEGLDRRAARERAIALLERTGIS
DAAHRFDSFPHQLSGGQRQRAMIAMALACRPKLLLADEPTTALDVTIRAQIMDLLRDLQAEFGMAVMLITHDLNLVRSFA
QRVGVMEKGVLVETGETAQVFAAPQHPYTRKLIDSRPRREVLPLVPLAPVLLEARKLSVNYARKRRGLAGWFGKDQFAAV
KDVDFQLREGETVGIVGESGSGKTTLAHTVLALQRKSGGTIHFLGRSFDTATRDDRRQLRARMQVVFQDPFGSLAPRMTI
EQIVGEGLALHQPGLSREGTRQRVIEALREVGLDRTALGRYPHEFSGGQRQRIAIARVLILKPQILVLDEPTSALDVSIQ
QQVLALLSQLQHKYNLTYLFISHDLAVIRAMAHRVFVMKAGEVVEAGDTEAVLGAPQHPYTRKLMAAAQVGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-76 45
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-76 45
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 5e-76 45
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-76 45
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-85 41