Gene Information

Name : CNE_2c08630 (CNE_2c08630)
Accession : YP_004681066.1
Strain :
Genome accession: NC_015723
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 924080 - 924493 bp
Length : 414 bp
Strand : -
Note : -

DNA sequence :
ATGGACCACACACTAACAATCGGGAAGCTGGCCAAGGCGGCTGGTGTTGGCGTGGAGACGGTACGTTACTACCATCGGTG
CGGCCTGCTGCCGGTGCCGGAGCGTGCCTATGGCGCCATTCGACAGTATTCGCAACAGAGCTTGCAGCGGCTTCATTTCA
TTCGCCAGGCCCAGTCGCTCGGGTTCACCCTGGATGAAGTCCGGGTACTGCTGCGACAGAACGATGGCGGGACGTGCAGC
ACAGCCCGCGCACTGGCCGAGCAAAAGCTCAGTCTTGTGGAGGAAAGATTGAAGGATTTGCGACGATTGCGAGCGGAACT
GAAGAATCTCATTGGGCAATGCCACGCCAATGGCAATGAGGCTTCTTGTCCCTTGATTGACTCTTTGTCCGCCAACATCG
GTAGAGAGGCTTAG

Protein sequence :
MDHTLTIGKLAKAAGVGVETVRYYHRCGLLPVPERAYGAIRQYSQQSLQRLHFIRQAQSLGFTLDEVRVLLRQNDGGTCS
TARALAEQKLSLVEERLKDLRRLRAELKNLIGQCHANGNEASCPLIDSLSANIGREA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13397.1 mercuric resistance operon regulatory protein Not tested PAGI-5 Protein 7e-32 54
merR CAJ77064.1 Mercury resistance operon regulatory protein Not tested AbaR1 Protein 4e-31 52
merR ACN81009.1 MerR activator/repressor of mer operon Not tested AbaR5 Protein 6e-31 52
merR AAN62181.1 organomercurial resistance regulatory protein MerR Not tested PAGI-2(C) Protein 4e-28 50
merR ACK44535.1 MerR Not tested SGI1 Protein 1e-30 50
merR AET25401.1 MerR Not tested PAGI-2(C) Protein 1e-30 50
merR AFG30124.1 MerR Not tested PAGI-2 Protein 1e-30 50
merR YP_006098391.1 mercuric resistance operon transcriptional regulator Not tested Tn2411 Protein 2e-30 50
merR AGK07025.1 MerR Not tested SGI1 Protein 1e-30 50
merR AGK07083.1 MerR Not tested SGI1 Protein 1e-30 50
EXB37 ABD94723.1 putative regulator of mercury resistance conferring proteins Not tested ExoU island B Protein 1e-27 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CNE_2c08630 YP_004681066.1 MerR family transcriptional regulator BAC0688 Protein 1e-31 52
CNE_2c08630 YP_004681066.1 MerR family transcriptional regulator BAC0689 Protein 8e-30 52
CNE_2c08630 YP_004681066.1 MerR family transcriptional regulator BAC0687 Protein 3e-30 50
CNE_2c08630 YP_004681066.1 MerR family transcriptional regulator BAC0683 Protein 2e-31 50
CNE_2c08630 YP_004681066.1 MerR family transcriptional regulator BAC0232 Protein 3e-30 50
CNE_2c08630 YP_004681066.1 MerR family transcriptional regulator BAC0684 Protein 2e-31 50
CNE_2c08630 YP_004681066.1 MerR family transcriptional regulator BAC0686 Protein 7e-32 50
CNE_2c08630 YP_004681066.1 MerR family transcriptional regulator BAC0301 Protein 2e-16 41