Gene Information

Name : CNE_2c08490 (CNE_2c08490)
Accession : YP_004681052.1
Strain :
Genome accession: NC_015723
Putative virulence/resistance : Virulence
Product : OmpR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 905848 - 906543 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence : 
ATGCCATTTGATTTTTCCCCGACAGTCTTGCTGGTTGAGGATGAGCCGCATATCCGGCGCTTTGTCCGCTCGACGCTGGA
GTCCGAAGGCTGCATGGTGCACGAGGCAGAATCGCTCAAGCGCGGACTGATCGAGGCGGGCACCCGGCAACCGGACCTCG
TCATTCTCGACCTGGGCTTGCCGGACGGAGACGGGGTGCAATTGATCAGCGAGATCCGTACGTGGACTGACGTACCGGTG
CTGGTCCTGTCGGCACGCAGTGGAGAGGCCGACAAGATCGGTGCGCTGGATGCCGGCGCGGATGACTACCTGACCAAGCC
CTTTGGCGTCGGCGAACTGGTCGCGCGCCTGCGCGTGCTGCTGCGCCGGCATGCCAGGGCCAACGCCCAGGGCTCCCACC
AGATCCTGTTCGGCGACGTGCAGATTGACCTGGCCAGCCGCGTCGTCACCCGCTCGGGACAGGCCGTGCATCTGACGCCG
ATCGAGTATCGTCTCCTGGCGGTCCTGATCGCGCACCGCGGCAAGGTGATGACGCACCGGGAATTGCTGCGGGAGGTGTG
GGGCCCCTCTCAGGCCGAAAGCAGCCAGTACCTGCGCGTCTATATGGGACATCTGCGGCACAAGCTCGAAGCAGACCCGG
CGCGGCCCGCTTACCTGCTGACGGAAATCGGGCTGGGCTACCGCTTTGCCGGATAA

Protein sequence : 
MPFDFSPTVLLVEDEPHIRRFVRSTLESEGCMVHEAESLKRGLIEAGTRQPDLVILDLGLPDGDGVQLISEIRTWTDVPV
LVLSARSGEADKIGALDAGADDYLTKPFGVGELVARLRVLLRRHARANAQGSHQILFGDVQIDLASRVVTRSGQAVHLTP
IEYRLLAVLIAHRGKVMTHRELLREVWGPSQAESSQYLRVYMGHLRHKLEADPARPAYLLTEIGLGYRFAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 6e-25 41
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 6e-25 41
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 6e-25 41
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 6e-25 41
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 3e-25 41
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 4e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CNE_2c08490 YP_004681052.1 OmpR family transcriptional regulator VFG1389 Protein 3e-23 42