Gene Information

Name : fliP (CNE_2c05100)
Accession : YP_004680723.1
Strain :
Genome accession: NC_015723
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 543666 - 544451 bp
Length : 786 bp
Strand : -
Note : -

DNA sequence :
ATGAATTTCCCGCGTGCCGCGCTGCGGCGCCCGCTGCCGGGCCCGCTGCTGTCCCTGCTCGCGCTGATGCTGGCCGTTGC
CGCGCTGGTGCCCGCACAGGCCTGGGCCCAGACACTGCCCGGCGTCGTCAGCAAGCCCGCCCCGGGCGGCGGCCAGATCT
GGTCGCTGCCGGTGCAGACGCTGCTGCTACTGACCTCGCTGTCGTTCCTGCCGGCGGCGATGCTGATGATGACCGGCTTC
ACCCGCGTCATCATCGTGCTGGGCCTGCTGCGCAGCGCACTGGGCACCGCCAGCTCGCCGCCCAACCAGGTGCTGGTGGG
CCTGTCGCTGTTCCTGACCTTCTTCGTGATGGCACCGGTGTTCGACCGCGTCTACAACGACGCCTACAAGCCGCTGTCGG
AAAACAAGATCAGCCTGGAGGCCGCCGCGGCCAAGGCCGCGGAGCCGCTCAAGGCCTTCATGCTGCGCCAGACCCGCGAG
AAAGACCTGGCCATGTTCGCGCAGATGGCCAAGGCGCCGGAGATGCAGGGCCCCGAGGAAGTCCCGCTCAGCATCCTGGT
GCCGGCCTTCGTCACCAGCGAGCTGAAGACCGCGTTCCAGATCGGCTTCACCATCTTCATCCCGTTCCTGATCATCGACC
TGGTCGTTGCCAGCGTGCTGATGGCGATGGGGATGATGATGGTGCCGCCGGCCACCATCTCGCTGCCGTTCAAGCTGATG
CTGTTCGTGCTGGTCGACGGCTGGCAGCTGCTGCTGGGTTCGCTGGCACAGAGCTTCATGAACTGA

Protein sequence :
MNFPRAALRRPLPGPLLSLLALMLAVAALVPAQAWAQTLPGVVSKPAPGGGQIWSLPVQTLLLLTSLSFLPAAMLMMTGF
TRVIIVLGLLRSALGTASSPPNQVLVGLSLFLTFFVMAPVFDRVYNDAYKPLSENKISLEAAAAKAAEPLKAFMLRQTRE
KDLAMFAQMAKAPEMQGPEEVPLSILVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMAMGMMMVPPATISLPFKLM
LFVLVDGWQLLLGSLAQSFMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 1e-24 43
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 1e-24 43
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 1e-24 43
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 3e-26 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 7e-25 41
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 5e-27 41
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 7e-27 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 7e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_004680723.1 flagellar biosynthesis protein FliP VFG2338 Protein 2e-72 76
fliP YP_004680723.1 flagellar biosynthesis protein FliP VFG2494 Protein 7e-68 74
fliP YP_004680723.1 flagellar biosynthesis protein FliP VFG1259 Protein 4e-54 60
fliP YP_004680723.1 flagellar biosynthesis protein FliP VFG2016 Protein 2e-51 54
fliP YP_004680723.1 flagellar biosynthesis protein FliP VFG0188 Protein 4e-29 42
fliP YP_004680723.1 flagellar biosynthesis protein FliP VFG0044 Protein 3e-28 41
fliP YP_004680723.1 flagellar biosynthesis protein FliP VFG0519 Protein 3e-27 41
fliP YP_004680723.1 flagellar biosynthesis protein FliP VFG0394 Protein 5e-27 41