Gene Information

Name : CNE_2c24730 (CNE_2c24730)
Accession : YP_004682650.1
Strain :
Genome accession: NC_015723
Putative virulence/resistance : Virulence
Product : OmpR family response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2661263 - 2661976 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCGTGCTGCTGGTGGAAGACGACGCCATGATCGGCGACAGCGTCAAGCTGGCGCTGCGCCAGGAAGGCTTTACCGT
CGACTGGGTGCGCGACGGCGACGCGGGCCTGGCCGCGGCCAGCACCGCGCAGGGCGGCCAGGCGTGCTATGACCTGATTC
TGCTCGACCTCGGTCTGCCGCGGCGCCCGGGCCTCGACGTGCTGCGCACCTTGCGCGCGCGCGGCGTGCCGACGCCGGTG
CTGATCCTGACCGCGCACGATGCCGTCGCGGACCGTGTCGCGGGGCTCAATGCCGGCGCCGATGATTACCTGGTCAAGCC
CTTTGACCTGCAGGAACTGGCGGCGCGCATGCACGCGCTGGCGCGCCGCGCCGCCGGCCGGGCGGAGCCGCTGGTCAGCT
ACGGCGACATCGTGCTCAACCCCACGACCCGCGAGGCCACCCACCGCGGCGAGCCGGTGCGGCTGTCGGCGCGCGAGTTC
GCGCTGCTGTCCGCGTTGATGGCGCGGCCCGGCAAGGTCTGGTCGGTGCCGCAATTGCAGGAGCGGCTGTACGGCTGGGA
CGACGAGGTCGGCAGCAATACCGTCGAGGTCTATATCCACGCGCTGCGCAAGAAGTTCGGCGCGGCGCTGATCCGCAATA
TCCGCGGCGTGGGCTACGTGGTGCCGCGCCTCGATGGGGATGCAGCATCCGCAGGCGAAGGAGACACCCCCTGA

Protein sequence : 
MRVLLVEDDAMIGDSVKLALRQEGFTVDWVRDGDAGLAAASTAQGGQACYDLILLDLGLPRRPGLDVLRTLRARGVPTPV
LILTAHDAVADRVAGLNAGADDYLVKPFDLQELAARMHALARRAAGRAEPLVSYGDIVLNPTTREATHRGEPVRLSAREF
ALLSALMARPGKVWSVPQLQERLYGWDDEVGSNTVEVYIHALRKKFGAALIRNIRGVGYVVPRLDGDAASAGEGDTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-27 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CNE_2c24730 YP_004682650.1 OmpR family response regulator BAC0197 Protein 1e-27 44
CNE_2c24730 YP_004682650.1 OmpR family response regulator BAC0487 Protein 4e-25 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CNE_2c24730 YP_004682650.1 OmpR family response regulator VFG0473 Protein 7e-28 43