Gene Information

Name : copA (CNE_2c21710)
Accession : YP_004682352.1
Strain :
Genome accession: NC_015723
Putative virulence/resistance : Virulence
Product : copper resistance protein A, multi-copper oxidase CopA
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2342695 - 2343390 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence : 
GTGAAACTGCTAGTGGTGGAGGACGAGTCCAAGACCGGCGAATACCTGCGCCAGGGGCTGACCGAGGCGGGCTTTGTCGT
CGACCTGGTGGCCAACGGGCTGGACGGCCAGCATCTGGCGATGACCGAGCCCTATGACCTGGTCATCCTGGATGTGATGC
TGCCGGACGTCGACGGCTGGCGCATCGTGCAGGCGCTGCGCGCCGCGGAGAACGCCGTGCCGGTGCTGTTCCTGACAGCG
CGCGACAGCGTGGCCGACCGCGTCAAGGGGCTGGAGCTGGGTGCGGACGACTACCTGGTCAAGCCCTTCGCCTTTTCCGA
GCTGCTCGCGCGGGTGCGCACGCTGCTGCGCCGGGGCACGGCACAGATGGCGCTGGACCGCATCCAGGTGGCCGACCTGA
TGCTGGACCTGGGCCGCCGCCGGGCCACGCGCGCCGGTCGCCGCATCACGCTGACCAGCAAGGAGTTCGCCTTGCTGGAA
CTGCTGGCACGCCGCCGCGGCGAAGTGCTGCCGCGCTCGCTGATCGCCTCGCAGGTGTGGGACATGAACTTCGACAGCGA
CAGCAATGTCATCGACGTCGCCATCCGGCGCCTGCGCGCAAAGATCGACGATGAGTTCGAGCCCAAGCTGATCCAGACCG
TGCGCGGCATGGGCTATGTGCTGGAAGCCCCCGAGGCAGCGGAGGACGCTGAATGA

Protein sequence : 
MKLLVVEDESKTGEYLRQGLTEAGFVVDLVANGLDGQHLAMTEPYDLVILDVMLPDVDGWRIVQALRAAENAVPVLFLTA
RDSVADRVKGLELGADDYLVKPFAFSELLARVRTLLRRGTAQMALDRIQVADLMLDLGRRRATRAGRRITLTSKEFALLE
LLARRRGEVLPRSLIASQVWDMNFDSDSNVIDVAIRRLRAKIDDEFEPKLIQTVRGMGYVLEAPEAAEDAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-52 59
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-51 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA BAC0111 Protein 6e-68 73
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA BAC0083 Protein 4e-61 71
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA BAC0638 Protein 1e-63 69
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA BAC0197 Protein 2e-58 67
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA BAC0347 Protein 2e-57 65
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA BAC0308 Protein 3e-56 64
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA BAC0125 Protein 2e-54 62
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA BAC0487 Protein 3e-27 41
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA NC_010079.5776364.p0 Protein 4e-29 41
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA NC_002952.2859858.p0 Protein 4e-29 41
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA NC_007622.3794948.p0 Protein 4e-29 41
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA NC_003923.1003417.p0 Protein 4e-29 41
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA NC_013450.8614146.p0 Protein 4e-29 41
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA NC_002951.3238224.p0 Protein 4e-29 41
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA NC_007793.3914065.p0 Protein 4e-29 41
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA NC_002758.1121390.p0 Protein 4e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA VFG0596 Protein 8e-53 59
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA VFG1389 Protein 4e-28 46
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA VFG1390 Protein 2e-35 45
copA YP_004682352.1 copper resistance protein A, multi-copper oxidase CopA VFG1386 Protein 1e-26 41