Gene Information

Name : hlyD (CNE_2c21030)
Accession : YP_004682284.1
Strain :
Genome accession: NC_015723
Putative virulence/resistance : Resistance
Product : secretion protein HlyD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2271264 - 2271956 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCGCAGCACCGCTGGTGCAGATCAGCCACGTCGCCAAATCCTACCGGCGCGGCGTGCAGACCGTTCCGGTGCTGAC
CGATATCTCGCTCGATATCGGCGAAGGCGAATTTGTTGCGCTGATGGGGCCGTCCGGCTCGGGCAAGAGCACGCTGCTGA
ACCTGATCGCCGGCATCGACCGGCCCGACAGCGGCACGCTGCACGTGGCGGGGCTGGACATCACGCGGCTGCCGGAAGCC
GAGCTGGCCGACTGGCGCGCCGCCAACGTCGGCTTTATCTTCCAGTTCTACAACCTGATGCCGGTGCTGACCGCGTTCGA
GAACGTGGAGCTGCCGCTGATGCTGACCAGCCTGCCGCGCGCGGAGCGGCGCGCGCGCGTGGAACTGGTGCTGGGCATGG
TCAATCTGGCCGACCGCATGAGCCACTACCCGTCGGAGCTGTCGGGCGGCCAGCAGCAGCGCGTGGCGATCGCGCGCGCG
CTGATCACCGACCCCGCGCTGATCGTCGCCGACGAGCCCACCGGCGACCTCGACCGCACCTCCGCCGCCGAGATCCTGGC
GATGATGCAGCGGCTCAATGCCGATGCCGGCAAGACCATCATCATGGTCACGCACGATGCGCACGCCGCCGCAGCGGCGG
GGTCGCTGGTGCACCTGGAGAAGGGGGAGCTGATCCGTGGCGAGATTGCCTAG

Protein sequence : 
MSAAPLVQISHVAKSYRRGVQTVPVLTDISLDIGEGEFVALMGPSGSGKSTLLNLIAGIDRPDSGTLHVAGLDITRLPEA
ELADWRAANVGFIFQFYNLMPVLTAFENVELPLMLTSLPRAERRARVELVLGMVNLADRMSHYPSELSGGQQQRVAIARA
LITDPALIVADEPTGDLDRTSAAEILAMMQRLNADAGKTIIMVTHDAHAAAAAGSLVHLEKGELIRGEIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-34 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hlyD YP_004682284.1 secretion protein HlyD NC_008702.1.4606598. Protein 2e-40 52
hlyD YP_004682284.1 secretion protein HlyD NC_012469.1.7686878. Protein 1e-45 50
hlyD YP_004682284.1 secretion protein HlyD CP001581.1.gene798.p Protein 8e-39 43