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Name : CNE_2c17710 (CNE_2c17710) Accession : YP_004681959.1 Strain : Genome accession: NC_015723 Putative virulence/resistance : Virulence Product : L-carnitine dehydratase/bile acid-inducible protein F Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 1903500 - 1904969 bp Length : 1470 bp Strand : - Note : - DNA sequence : ATGAAGCAGTATCAAATGTTCATCGACGGCACCTTCGTCAATGCGAGCGACGGTCGCTGGTTTGAAACCCAGAATCCCTT TACCGGCAAGACCTGGGCCGAAGTGGCCCGCGGCACCGCAGCAGATATCGATCGCGCCGTGCAGGCGGCCGATCAGGCGT TCCGCTCGGGGCCGTGGTCGGAGATGACGGCGACGCAGCGTGGCGCCTTGCTGCGCAAGCTCGGCGACCTGATCGCCCGG GACGCGGAGCGGCTGGCCGAGTTCGAAGTGCAGGACAACGGCAAGCTGCTGGCGGAGATGGGCGCCCAGCTCAAGTACCT GCCGCAGTGGTTCTATTACTTCGGCGGGCTGGCCGACAAGATCGAAGGCACGGTCATTCCGCTCGACAAGAAGGGCTATT TCAACTACACCCGGCGCGAGCCGCTGGGCGTGGTGGCGGCCATCACGCCGTGGAACTCACCGCTGATGCTGCTGGCGTGG AAGATCGCGCCGGCTCTCGCGGCGGGATGTACCGTGGTGGTGAAGCCGTCGGAGTTCACTTCGGTGTCTGCGCTCGAGCT TGCGCTGCTGTTCGAGGAAGCCGGCTTTCCCGCGGGCGTCTTCAACGTCGTGACCGGGTTTGGCGTCGAGGTGGGCTCGC CGCTGGTGACGCATCCGCTGGTCAAGAAGGTGACCTTCACCGGATCGGACGCCACCGGACGCGTGATCAACCAGCAGTGT GCGGCGCAGTTCAAGCACGTGAGCCTGGAGCTCGGCGGCAAGTCGCCGAACATCGTCTTCAACGATGCCAACCTGGATGA CGCCGTCAACGGCGCCGTCTCCGGCATCTTCGCCGCCAGCGGCCAGACCTGTATCGCCGGTTCGCGGCTGCTGCTGCAGG AAGACATTCACGATATCTTTGTCGAGAAGCTGCTGGCGCTGGCCAGCACGGCAAAGCTCGGCAACCCGATGAATGCCTCC ACGCAGGTGGGGCCCATCACCACGCCCGCGCAATACGAAAAGGTGCTGTCGTATATCCAGATCGCGCAGGACGAAGGGGC GGAGCTGCTGCTCGGCGGCAAGCCGGCGTCCTGCGGCGACGGATGGTTTGTCGAGCCGACCATCTTTGCCAGGGTCTCGC CGAAGATGCGCATCGCGCAGGAGGAGGTGTTCGGGCCGGTGCTGTCCATCCTGAAGTTCAGGGACGAAGCCGACGCCATC GCGATTGCCAATGACAGTTGTTATGGGCTTGGAGCGGGGGTCTGGACATCCGACATCGGTCGTGCCTTCCGCATGTCGGA GAAGATCCAGGCGGGCACGGTCTGGGTCAATACCTATCGCGCGGTCAGCTTTATGTCGCCGTTCGGCGGGTACAAGGACT CGGGCCTCGGCCGTGAAAACGGCATCGCTGCCATCGAGTCGTACCTGCAGACCAAGAGTGTGTGGATCAATACGGGAGCG GCTACGGGTAATCCGTTCATGATCCGCTGA Protein sequence : MKQYQMFIDGTFVNASDGRWFETQNPFTGKTWAEVARGTAADIDRAVQAADQAFRSGPWSEMTATQRGALLRKLGDLIAR DAERLAEFEVQDNGKLLAEMGAQLKYLPQWFYYFGGLADKIEGTVIPLDKKGYFNYTRREPLGVVAAITPWNSPLMLLAW KIAPALAAGCTVVVKPSEFTSVSALELALLFEEAGFPAGVFNVVTGFGVEVGSPLVTHPLVKKVTFTGSDATGRVINQQC AAQFKHVSLELGGKSPNIVFNDANLDDAVNGAVSGIFAASGQTCIAGSRLLLQEDIHDIFVEKLLALASTAKLGNPMNAS TQVGPITTPAQYEKVLSYIQIAQDEGAELLLGGKPASCGDGWFVEPTIFARVSPKMRIAQEEVFGPVLSILKFRDEADAI AIANDSCYGLGAGVWTSDIGRAFRMSEKIQAGTVWVNTYRAVSFMSPFGGYKDSGLGRENGIAAIESYLQTKSVWINTGA ATGNPFMIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-73 | 44 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-78 | 43 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 8e-80 | 43 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 8e-80 | 43 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 8e-80 | 43 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-79 | 43 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 8e-77 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CNE_2c17710 | YP_004681959.1 | L-carnitine dehydratase/bile acid-inducible protein F | VFG0082 | Protein | 1e-78 | 43 |
