Gene Information

Name : czcS (CNE_2c16400)
Accession : YP_004681828.1
Strain :
Genome accession: NC_015723
Putative virulence/resistance : Virulence
Product : sensor protein CzcS
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : 2.7.13.3
Position : 1771191 - 1771880 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGCGTATCCTGATTGTCGAGGACGAACCCAAGGCGGGTGACTACCTGCACAAGGGCCTGACCGAATCCGGCTTCGTGGT
GGACCTGGCGCGCGACGGCGCGGACGGCCTGGCCCATGCGCGCGAGCATCCCTATGACCTGATCGTGCTGGACGTGATGC
TGCCCGGCCTGGATGGCTGGCAGGTGCTGCGCGAACTGCGCCGCGAGCGCGATACCCCGGTACTTTTCCTGACCGCGCGC
GACGAACTGTCGGACCGCCTCAAGGGGCTGGAGCTCGGCGCCGACGACTATATGGTCAAGCCCTTTGCCTTTGCCGAACT
GGTGCTGCGCATCCGCACCATCCTGCGGCGCGGCCCGCTGCGCGAGAGTGAGTTCATCGAAGTGGCCGACCTGCAGATCG
ACGCCATCCGCCGCCGTGTGGTGCGCGCCGGCCAGAAGATCGACCTGACCTCCAAGGAGTTTGCGCTGCTGTACCTGCTG
GCGCGCCGGCGCGGTGAGGTGCTGTCGCGTTCGCTGATCGCCTCGCAGGTGTGGGACGTCAATTTCGACAGCAATACCAA
TGTGGTCGACGTCTCGATCCGGCGCCTGCGCGCCAAGGTCGACGATCCCTTCCCGCACAAGCTGATCCACACGCGGCGCG
GCATGGGCTACGTGCTGGACGACAGCGAGGACCGGGGCCAGGACGCATGA

Protein sequence : 
MRILIVEDEPKAGDYLHKGLTESGFVVDLARDGADGLAHAREHPYDLIVLDVMLPGLDGWQVLRELRRERDTPVLFLTAR
DELSDRLKGLELGADDYMVKPFAFAELVLRIRTILRRGPLRESEFIEVADLQIDAIRRRVVRAGQKIDLTSKEFALLYLL
ARRRGEVLSRSLIASQVWDVNFDSNTNVVDVSIRRLRAKVDDPFPHKLIHTRRGMGYVLDDSEDRGQDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-59 56
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-57 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
czcS YP_004681828.1 sensor protein CzcS BAC0197 Protein 3e-70 66
czcS YP_004681828.1 sensor protein CzcS BAC0125 Protein 1e-71 65
czcS YP_004681828.1 sensor protein CzcS BAC0638 Protein 2e-61 63
czcS YP_004681828.1 sensor protein CzcS BAC0083 Protein 3e-67 61
czcS YP_004681828.1 sensor protein CzcS BAC0308 Protein 2e-64 59
czcS YP_004681828.1 sensor protein CzcS BAC0111 Protein 6e-63 58
czcS YP_004681828.1 sensor protein CzcS BAC0347 Protein 6e-55 54
czcS YP_004681828.1 sensor protein CzcS NC_007622.3794948.p0 Protein 9e-43 46
czcS YP_004681828.1 sensor protein CzcS NC_003923.1003417.p0 Protein 9e-43 46
czcS YP_004681828.1 sensor protein CzcS NC_013450.8614146.p0 Protein 9e-43 46
czcS YP_004681828.1 sensor protein CzcS NC_002951.3238224.p0 Protein 9e-43 46
czcS YP_004681828.1 sensor protein CzcS NC_007793.3914065.p0 Protein 9e-43 46
czcS YP_004681828.1 sensor protein CzcS NC_002758.1121390.p0 Protein 9e-43 46
czcS YP_004681828.1 sensor protein CzcS NC_010079.5776364.p0 Protein 9e-43 46
czcS YP_004681828.1 sensor protein CzcS NC_002952.2859858.p0 Protein 9e-43 46
czcS YP_004681828.1 sensor protein CzcS AE015929.1.gene1106. Protein 3e-37 44
czcS YP_004681828.1 sensor protein CzcS HE999704.1.gene2815. Protein 7e-32 42
czcS YP_004681828.1 sensor protein CzcS AE000516.2.gene3505. Protein 1e-31 42
czcS YP_004681828.1 sensor protein CzcS NC_002758.1121668.p0 Protein 7e-34 41
czcS YP_004681828.1 sensor protein CzcS NC_009641.5332272.p0 Protein 7e-34 41
czcS YP_004681828.1 sensor protein CzcS NC_013450.8614421.p0 Protein 7e-34 41
czcS YP_004681828.1 sensor protein CzcS NC_007793.3914279.p0 Protein 7e-34 41
czcS YP_004681828.1 sensor protein CzcS NC_007622.3794472.p0 Protein 5e-34 41
czcS YP_004681828.1 sensor protein CzcS NC_002745.1124361.p0 Protein 7e-34 41
czcS YP_004681828.1 sensor protein CzcS NC_009782.5559369.p0 Protein 7e-34 41
czcS YP_004681828.1 sensor protein CzcS NC_002951.3237708.p0 Protein 7e-34 41
czcS YP_004681828.1 sensor protein CzcS NC_002952.2859905.p0 Protein 6e-34 41
czcS YP_004681828.1 sensor protein CzcS HE999704.1.gene1528. Protein 2e-28 41
czcS YP_004681828.1 sensor protein CzcS BAC0596 Protein 3e-26 41
czcS YP_004681828.1 sensor protein CzcS BAC0039 Protein 2e-26 41
czcS YP_004681828.1 sensor protein CzcS CP001138.1.gene2239. Protein 3e-26 41
czcS YP_004681828.1 sensor protein CzcS CP000034.1.gene2186. Protein 2e-26 41
czcS YP_004681828.1 sensor protein CzcS NC_002695.1.916589.p Protein 2e-26 41
czcS YP_004681828.1 sensor protein CzcS CP001918.1.gene5135. Protein 2e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
czcS YP_004681828.1 sensor protein CzcS VFG0596 Protein 3e-59 56
czcS YP_004681828.1 sensor protein CzcS VFG1389 Protein 9e-35 47
czcS YP_004681828.1 sensor protein CzcS VFG1386 Protein 1e-36 44
czcS YP_004681828.1 sensor protein CzcS VFG1390 Protein 4e-37 43