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Name : arnD (CNE_2c16370) Accession : YP_004681825.1 Strain : Genome accession: NC_015723 Putative virulence/resistance : Resistance Product : 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : 3.5.1.n3 Position : 1766734 - 1769118 bp Length : 2385 bp Strand : - Note : - DNA sequence : ATGGCTCGCACGTCACCTGAGGACGCACTTCCTCAAGATCACGCTGCCCACGCGCACGATGGCGCCACCCACCGGCATGG CGGGCATGATCACGACCATCACCATCACCATCACCACCACGACCATGATCATCATGGGCATGGCCATGCGGAGGCCCGGC AAGCACCGGCGGCTTCCGCCTGCTGTGGCGGCGGCTGCTCGGCCACGGTTGCGCTGACGCCCGCGGCATCGGTCGACATT CCCGCCGGCGCGCAGACCGCTGCATGGCGCATTGACGCGATGGACTGCCCGACCGAGGAAACGCTGATCCGCAGCAAGCT GGGCGGCATGGCGGGCGTGGCGGCGCTGGAGTTCAACCTGATCCAGCGGGTGCTGACGGTGCATCACACCTTGCCGTCGC CGGAGCCGGTGGCTAGGGCGATCGAGAGCCTGGGCATGCAGCCGGTGCCGCTGAGCACCGAGGCCGCGCAGCAAGTCTTG CCGCAATCCACGACAAGCAAGCCCTGGTGGCCGCTGGCGCTGGCCGGCGTGGCCGCTTTGGGTGCCGAAGCGGCGGAGTG GCTGGGTCTGGGCTTGCCGTGGCTGCCCGCCGCGCTGGCACTGGCGGCAGTGGCGCTGGGCGGGCTGACCACCTACCGCA AGGGCTGGATCGCGTTGCGCAATGGCAACCTGAACATCAATGCCCTGATGAGCATTGCCGTCACCGGCGCACTGCTGCTG CGCCAGTGGCCGGAAGCGGCCATGGTGATGGTGCTGTTCGCGCTGGCCGAGCGCATCGAGGCGGCCTCGCTGGACCGGGC GCGCAACGCGATCCGCGGCTTGATGGCGATGGCGCCGGAACAGGCCACGGTGCGTCGCGCCGATGGCAGCTGGGACACCG TGCCCGCCGCCGGCGTTGCCGTGGGGGCGCTGGTGCGGCTGCGGCCGGGCGAGCGCGTCGCGCTTGACGGCAAGGTCGTG CGCGGCCAGTCGGCGCTGGACCAGGCGCCCATCACCGGCGAAAGCGTGCCGGTCGACAAGGCCGAGGGCGATGTGCTGTT CGCCGGCTCGATCAACCAGTCCGGCGAGCTGGAGTACACCGTGACGGCGCCCGCCAGCGATTCCACGCTGGCCCGCATCA TCCACGCGGTGGAGGCCGCGCAGGGCAGCCGTGCGCCCACGCAGCGCTTTGTCGACCAGTTCGCGCGCATCTACACGCCC ACGGTGTTCGCGATTGCGCTGGCGGTCGCGGTGGTGCCGCCGCTGGCCATGGGCGGTGCCTGGGTCGACTGGATCTACAA GGCGCTGGTGCTGCTGGTGATCGCCTGCCCCTGCGCGCTGGTGATCTCCACGCCGGTGACCATCGTCAGCGGGCTGGCCG CGGCCGCGCGCCGCGGCATCCTGGTCAAAGGCGGGGTGTACCTGGAGCAGGGCCGGCACCTGGCCTGGGTGGCGCTGGAC AAGACCGGCACGATCACGCACGGCAAGCCCGCGCAGACCGACCACGCGCTGCTGGCCGAGGACGCGCCGCATGCCCGCGC CATTGCTGCCAGCCTGGCGGCGCGCTCGGACCATCCGGTTTCGCGCGCGGTGGCCACGGCGGCCACGGCCGACGGGATCG GCACGCTGCCGGTGGACGACTTCGAGGCGCTGGCGGGGCGCGGCACGCGCGGCAAGGTGCAGGGCGTGGCGTACTGCTTG GGCAACCACCGCCTGGTGCATGAGATGGGCGCCTGCTCGCCGGCGCTGGAGGCGCGGCTCGAAGCGCTGGAGCGCGAGGG CAAGACCGTGGTGCTGCTGGCGCGCGTCGACGGCAACGGCGCCGCCACGGCGCTGGCGCTGTTCGCGGTGGCGGATACCG TGCGCGACACCAGCCGGCAGGCGATTGCCGAGCTGCATGAACTGGGCGTCAGGACACTGATGCTGTCGGGCGACAATCCG CACACGGCGCAAGCCATTGCCGCGCAGGTCGGCATCGATGAAGCGCGCGGCAACCAGTTGCCGCAGGACAAGGCCGACGG CATCGCGGCGCTTGCCGGCGCCGCCCACGCGCGCGGCGGCCGCATCGGCATGGTGGGCGACGGCATCAACGACGCACCGG CGCTGGCGCGTGCCGATATCGGCTTCGCCATGGGCGCAGCCGGCACCGACACCGCTATCGAGACGGCCGACGTGGCGCTG ATGGACGATGACCTGCGCAAGATCCCGGCCTTTGTGCGCCTGTCGCGCCGCACCGCAAGCATCCTCACGCAGAACATCAC GCTGGCGCTCGGCATCAAGGCCGTGTTCCTGGTGCTGACGGTGCTGGGGATGGGGACGATGTGGATGGCGGTGTTCGCCG ATATGGGCGCGAGCCTGCTGGTGGTGTTCAACGGGCTGCGGGTGGGGGCGGAGCGGCGCGGCTAG Protein sequence : MARTSPEDALPQDHAAHAHDGATHRHGGHDHDHHHHHHHHDHDHHGHGHAEARQAPAASACCGGGCSATVALTPAASVDI PAGAQTAAWRIDAMDCPTEETLIRSKLGGMAGVAALEFNLIQRVLTVHHTLPSPEPVARAIESLGMQPVPLSTEAAQQVL PQSTTSKPWWPLALAGVAALGAEAAEWLGLGLPWLPAALALAAVALGGLTTYRKGWIALRNGNLNINALMSIAVTGALLL RQWPEAAMVMVLFALAERIEAASLDRARNAIRGLMAMAPEQATVRRADGSWDTVPAAGVAVGALVRLRPGERVALDGKVV RGQSALDQAPITGESVPVDKAEGDVLFAGSINQSGELEYTVTAPASDSTLARIIHAVEAAQGSRAPTQRFVDQFARIYTP TVFAIALAVAVVPPLAMGGAWVDWIYKALVLLVIACPCALVISTPVTIVSGLAAAARRGILVKGGVYLEQGRHLAWVALD KTGTITHGKPAQTDHALLAEDAPHARAIAASLAARSDHPVSRAVATAATADGIGTLPVDDFEALAGRGTRGKVQGVAYCL GNHRLVHEMGACSPALEARLEALEREGKTVVLLARVDGNGAATALALFAVADTVRDTSRQAIAELHELGVRTLMLSGDNP HTAQAIAAQVGIDEARGNQLPQDKADGIAALAGAAHARGGRIGMVGDGINDAPALARADIGFAMGAAGTDTAIETADVAL MDDDLRKIPAFVRLSRRTASILTQNITLALGIKAVFLVLTVLGMGTMWMAVFADMGASLLVVFNGLRVGAERRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 1e-104 | 46 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 1e-104 | 46 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 1e-103 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| arnD | YP_004681825.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD | BAC0298 | Protein | 7e-164 | 73 |
| arnD | YP_004681825.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD | BAC0461 | Protein | 5e-74 | 41 |
