Gene Information

Name : CNE_2c16110 (CNE_2c16110)
Accession : YP_004681799.1
Strain :
Genome accession: NC_015723
Putative virulence/resistance : Resistance
Product : ABC transporter permease
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1739344 - 1740039 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence : 
GTGCTGACCCTTACAGACGTCTCCAAGACATACAACGGCGCCCGACCGCGCACCGTTCTCCGCGGAGTCAGTCTTGCGCT
GGACGCCGGCGAATATGTCGCCGTCATGGGTGAATCTGGCGTGGGCAAGTCGACGCTGCTCCACCTGATCGCCGGCCTGG
ATCGGCCCGACAGTGGCTGCATCCAGTTCGACGGACAGGACCTGGGCAAGCTGGACGACGATGCCGCAACCTTGCTGAGG
CGGCGAAAGCTGGGGTTCGTGTTCCAGGCCTTCCATGTTCTGCCGAATTTGAGCGCGGCGCAGAACGTGGCGCTGCCTCT
GCTGTTGAACGGCCTCGAGTGGGAAAAGGCGTCGGCCCGCGTTGCCGAGATGCTTGCCGCGGTTGGGCTTGAGGGGCGCG
AGGACAGTATGCCGCGCGAGCTTTCCGGCGGGGAACTGCAGCGGGTGGCGATTGCACGTGCCCTGGTACACCGGCCGATG
CTGCTGCTGGCAGATGAGCCCACTGGCAACCTTGATCACGAGACGGCTGCGCGGGTGCTGAGCCTGCTGCGCGAACTGGT
CAACGCAAACGGCACGGCCGCGATTATCGTCACGCACTCGGCACTGGCTGCGGCGACGGCGGATCGCGTCTTGCAGTTGA
CGCCAGGCGGATTGACGCCGCTGGGGCCCCAGCCGCCGATGAGCGCGGCAGCCTGA

Protein sequence : 
MLTLTDVSKTYNGARPRTVLRGVSLALDAGEYVAVMGESGVGKSTLLHLIAGLDRPDSGCIQFDGQDLGKLDDDAATLLR
RRKLGFVFQAFHVLPNLSAAQNVALPLLLNGLEWEKASARVAEMLAAVGLEGREDSMPRELSGGELQRVAIARALVHRPM
LLLADEPTGNLDHETAARVLSLLRELVNANGTAAIIVTHSALAAATADRVLQLTPGGLTPLGPQPPMSAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-34 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-34 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 43
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 5e-18 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CNE_2c16110 YP_004681799.1 ABC transporter permease NC_008702.1.4606598. Protein 6e-41 51
CNE_2c16110 YP_004681799.1 ABC transporter permease NC_012469.1.7686878. Protein 3e-38 44
CNE_2c16110 YP_004681799.1 ABC transporter permease CP001581.1.gene798.p Protein 9e-41 43
CNE_2c16110 YP_004681799.1 ABC transporter permease CP001581.1.gene598.p Protein 1e-37 42