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Name : clpC (CNE_2c13400) Accession : YP_004681535.1 Strain : Genome accession: NC_015723 Putative virulence/resistance : Virulence Product : ATP-dependent protease Clp, ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1420244 - 1423018 bp Length : 2775 bp Strand : - Note : - DNA sequence : ATGCCGACCCTATGCGAAATCTGCAACGCACGTCCCGCCGTGGCACGGGTGACCGTGGTTCAGGACGGCGAGCGCAAGAC GATGTCGATCTGCGACTACGACTACCGGCAGCTGCTGCGCCACCAGGACATGCTCAACCCGTTCGACTCCCTGCTGGGTG GCGGCGGCCTGTCCCGCTTCTTCCGCGGAATGGGAGGCGGGATGGATGACGACGAGCATCCCGGGTACTCCACCGAAGTT CCGCGCGAATCCGTCGACCCCACCGATGCCTTCAGCGAGCAGACCATGGAGCTGCTGCAGCGCGCCGCGGAGAAGGCCCA CGAGCTGCGGCGCAATGAACTCGATACCGAGCACCTGCTCTACGTGCTCGCCGATACCGATGTCTGCACGGCGCTGCTCA AGGAGCTCAAACTCTCGCCGCAGGACATCAAGGGCTATATCGACGAGCATGCGCAGACCGGAACCGCCGAACCCGACGCG GCCATCGACCGGATGACGATCTCGCCGCGGCTGAAGAAGGCCTTCCAGTTTGCCTTCCAGGCCTCGCGCGACCTGGGGCA TTCCTACGTTGGACCCGAGCACCTGCTGATCGGCCTGGCCTCGGTGCCGGACAGTATTGCCGGGACGCTGCTGAAAAAAT ACGGCGTGACCCCCGAGGCGCTGCGCCAGAAGGTGGTGAAGGTGGTCGGCAAAGGCGCTGAAGACGGCCGCGTCGACACG CCGACCGGCACGCCCACGCTGGACAAGTTCGGGCGCGACCTGACCGCGATTGCGCGGCAGGGCAAGCTCGATCCGGTGCT GGGCCGTGCGCAGGAGATCGAGAGCACGATCGAAGTGCTGGCGCGGCGCAAGAAGAACAACCCGGTGCTGATCGGCGAGC CAGGCGTGGGCAAGACCGCCATCGTGGAAGGCCTGGCGCAGCGCATCGTCAATGGCGATGTGCCGGAGGTGCTGCGCGGC AAGCGTCTGGTTGAGGTGAACATCAATTCGATGGTCGCCGGGGCCAAGTACCGCGGCGAGTTCGAGGAGCGTGCCAAGCA GCTGATCGATGAGGTCACGGCCAAGAACGACGAACTGATCCTGTTTATCGACGAACTGCACACCATCGTCGGCGCGGGGC AGGGCGGCGGCGAGGGCGGGCTCGATATCGCCAACGTGCTCAAGCCCGCGCTGGCGCGCGGGGAACTGAGCCTGATCGGC GCCACCACGCTGAACGAATACCAGAAATACATCGAGAAAGACGCGGCGCTGGAGCGGCGCTTCCAGCCGGTGCTGGTGCC GGAGCCGACTGTCGAGCAGACCATCGTCATCCTGCGCGGCCTGCGCGACAAGCTTGAGGCGCACCACCAGGTCACCTTCG CCGACGACGCCTTTGTCGCCGCGGCGGAACTGTCGGACCGCTACATCACCTCGCGCTTCCTGCCGGACAAGGCCATCGAC CTGATCGACCAGGCCGCGGCGCGCGTGCGCATCGGCGCCACCTCGCGCCCCGCGGATATCCAGGAACTGGAGGCCGAGAT CGCCCAGCTCAAGCGCGAGCAGGACTATGCGTCGTCGCGCAAGCGCTTTGACGAGGCCAAGGGCTTCGAGGACCGCATCA ACGACAAGCAGAAGCGGCTTGATGAGCTGACCGAGGCATGGCAGCGCAAGACCGGGTCGGAGACCCTGGAGGTGACAGTC GCGGCCATTGCCGAAGTGGTGTCGCGCCTGACCGGCATCCCGGTGACCGACCTGACCCAGGAAGAGCGCCAGAAGCTGCT TAAGATGGAAGCGCGGCTGCGCGAGCGGGTGGTGGGGCAGGAGGACGCGGTGGTCGCGGTCAGCGACGCGGTGCGCTTGT CGCGTGCGGGCCTGGGCCAGGCCAACCGCCCGATCGCGACTTTCCTCTTCCTCGGGCCGACCGGCGTCGGCAAGACCGAG CTGGCCAAGGCCCTGGCGGAAACCGTGTTCGGCGACGAGCAGGCCATCATCCGCATCGACATGTCCGAGTACATGGAGCG CCATGCGGTGGCCCGGCTGATCGGCGCGCCCCCGGGCTATGTCGGTTACGACGAAGGCGGGCAGCTGACCGAGCGCGTGC GGCGCAAGCCCTATAGCGTGATCCTGTTGGATGAAATCGAGAAGGCCCACCCGGACGTGAACAACGTGCTGCTGCAGGTC TTCGATGATGGCCGCTTGACCGACGGCAAGGGCCGCGTGGTGGACTTCAGCAACACCGTCATCATCGCCACCAGCAACCT GGGCGCGCCGATCATCATGGATAACCTGGAGCAGCCCGAGGACAAGCGCATGCCTGAGAAGGACTTGCGCGAGGCGCTGA TGAAGGTGCTGAAGGGACACTTCCGGCCCGAGTTCCTGAACCGCATCGACGACATCATCGTGTTCCATGCGCTGTCGCGC GAGAACATCCGCGCGATCGTGCAGATCCAGCTGGAGCGCGTGGTGCGCACCGCCGCCGCGCAGGACATCACGGTCAAGCT CGACGATGACCTGGTCGATCATCTGGTCGAGGTGGGCTACCAGCCTGAGTTCGGTGCGCGGGAGCTGCGGCGCCAGATCC GCCAGTCGGTCGAGACCGGTCTGGCCAAGGAGATTCTCGGCGACAAGCTGAAATCCGGCGACAGCGTCGAGCTCGGCTAC GACAAGGCAAGCGACGCCGTGGTCTTCAGGAAGATGGAAGCCGTCCAGAAGCCGAAGGCAGGCAAAGCAGCGGCCAAGGG CGCTGCACCCAAGCAGGCGGATAGCACCGTCGCGGCAGGAGACTCCAGCGCTTGA Protein sequence : MPTLCEICNARPAVARVTVVQDGERKTMSICDYDYRQLLRHQDMLNPFDSLLGGGGLSRFFRGMGGGMDDDEHPGYSTEV PRESVDPTDAFSEQTMELLQRAAEKAHELRRNELDTEHLLYVLADTDVCTALLKELKLSPQDIKGYIDEHAQTGTAEPDA AIDRMTISPRLKKAFQFAFQASRDLGHSYVGPEHLLIGLASVPDSIAGTLLKKYGVTPEALRQKVVKVVGKGAEDGRVDT PTGTPTLDKFGRDLTAIARQGKLDPVLGRAQEIESTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRIVNGDVPEVLRG KRLVEVNINSMVAGAKYRGEFEERAKQLIDEVTAKNDELILFIDELHTIVGAGQGGGEGGLDIANVLKPALARGELSLIG ATTLNEYQKYIEKDAALERRFQPVLVPEPTVEQTIVILRGLRDKLEAHHQVTFADDAFVAAAELSDRYITSRFLPDKAID LIDQAAARVRIGATSRPADIQELEAEIAQLKREQDYASSRKRFDEAKGFEDRINDKQKRLDELTEAWQRKTGSETLEVTV AAIAEVVSRLTGIPVTDLTQEERQKLLKMEARLRERVVGQEDAVVAVSDAVRLSRAGLGQANRPIATFLFLGPTGVGKTE LAKALAETVFGDEQAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRKPYSVILLDEIEKAHPDVNNVLLQV FDDGRLTDGKGRVVDFSNTVIIATSNLGAPIIMDNLEQPEDKRMPEKDLREALMKVLKGHFRPEFLNRIDDIIVFHALSR ENIRAIVQIQLERVVRTAAAQDITVKLDDDLVDHLVEVGYQPEFGARELRRQIRQSVETGLAKEILGDKLKSGDSVELGY DKASDAVVFRKMEAVQKPKAGKAAAKGAAPKQADSTVAAGDSSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-164 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_004681535.1 | ATP-dependent protease Clp, ATPase | VFG0079 | Protein | 0.0 | 52 |
| clpC | YP_004681535.1 | ATP-dependent protease Clp, ATPase | VFG0080 | Protein | 4e-132 | 47 |
